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The map label for this gene is 55980948

Identifier: 55980948

GI number: 55980948

Start: 922451

End: 923746

Strand: Reverse

Name: 55980948

Synonym: TTHA0979

Alternate gene names: NA

Gene position: 923746-922451 (Counterclockwise)

Preceding gene: 55980949

Following gene: 55980947

Centisome position: 49.94

GC content: 70.14

Gene sequence:

>1296_bases
ATGCTCTCCCCCAAAGAAAGGAGGTGGAGCGTGCGGAAAGCGGGTTTCTTGGCCTTCCTTTTGGCCTCGAGCCTGGGCCT
GGCCCAAGGGGTGGTCTTCCTTTCCACCCAGCTCAGGCCCATTGAAGAGGCCCAGAAGATGCGGCAGGTGATCCTGAAGG
GCTTCTCCGGCCAGGTCCAGTTCGTGCCCGAGGACTACCCCGTTTGGCTCAACCGGGTGCTGGCCGAGGCCCAGACGGGC
CGGGGGACCGTGGGGGTTTTGGGCGGGCTCCACGGGGACTTTCCCCCCTTGGTGAGCCGGGGGCTTCTGGAGCCTTTGGA
CGGCCTCTACGCCCGGCTTCAGGACCGGGGCTTCCCCCAGGCGTTCGTGGAGCTCGGGCGGATGGGCACCCCGAACCAGC
AGTACCTCCCCTGGATGCAGGCCACCTACGTCATGGTGGCCCGGAAGGAGGCCCTGAAGTACCTTCCCCCGGGAGCCGAC
CTCAACGCCCTCACCTACGAGGACCTCAAGAACTGGGCCAAGGCGATCCAGGAGGCCACGGGCCAGCGCCGCCTGGGCTT
CCCCGCGGGGCCTGGAGGGCTCATCCACCGCTTCCTCCAGGGCTACCTCTACCCCTCCTACACGGGCAGCCAGGTGCGCC
GCTTCAAGAGCCCCGAGGCCGAGGCCATGTGGCGGGACTTCCGGGAGCTTTGGCGCTACGTCAACCCCAGGTCCACGGCC
TACGAGTTCATGCAGGAGCCCCTCCTCTCCGGGGAGGTTTGGATCGCCTGGGACCACACGGCGCGGCTCAAGGACGCCCT
GGTGCAGAGGCCCCAGGACTTCGTGGCCTTCCCGGCCCCCGCAGGGCCCAAGGGGCGGGGGTTCATGCCGGTGGTGGCGG
GGCTCGCCATCCCCAAGACCGCGCCCGACAAGCGGGCCGCCGAGGCGCTCGTGGACTACCTGACGCGGCCCGAGGTCCAG
CTCCTCACCCTCAAGGAGGTGGGCTTCTTCCCCGTGGTGCGGGCGCGCTACGGGGAGGACCTGCCCGAGGGGATCCGGCT
CCTCGCCGAGGCGGTCTCGGCCCAGTCCTCGGCCAAGGACGCCCTGCCGAGCCTCCTCCCCGTGGGGCTTGGGGACAAGG
GCGGGGAGTTCAACAAGGTCTACCGGGACGCCTTCACCCGGATCGTCCTCCGGGGGGAGGAGATCCGGCGGGCCTTGGAC
CTCGAGGCCCAGAACCTCGCCCGCATCCTCCGGGAGACGGGCGCCCCCTGCTGGCCGCCCGACGCCCCGAGCACGGGCGC
CTGCCCCGTGGAGTGA

Upstream 100 bases:

>100_bases
AGACCGCTAGGGGCGGCCCCGGGAGGCTCCCGGGGCCCGCTTCTTCACTTTCCCGTGGAGGGGGTTTCAAAAGCCTTGAC
GGGGGGCGGGAAAGGGGGGT

Downstream 100 bases:

>100_bases
TAGATTGAGCCCGTGGCGCCTTTGAGGACGAAGGCGGTGGAGGTCCTCCAGCGCAACAGCCGGGGGGCCTTCACCGTCCC
CGCGCACGGGCTCTACCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: ABC-Type Transport System Periplasmic Component; Motifprokaryotic Membrane Lipoprotein Lipid Attachment Site

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MLSPKERRWSVRKAGFLAFLLASSLGLAQGVVFLSTQLRPIEEAQKMRQVILKGFSGQVQFVPEDYPVWLNRVLAEAQTG
RGTVGVLGGLHGDFPPLVSRGLLEPLDGLYARLQDRGFPQAFVELGRMGTPNQQYLPWMQATYVMVARKEALKYLPPGAD
LNALTYEDLKNWAKAIQEATGQRRLGFPAGPGGLIHRFLQGYLYPSYTGSQVRRFKSPEAEAMWRDFRELWRYVNPRSTA
YEFMQEPLLSGEVWIAWDHTARLKDALVQRPQDFVAFPAPAGPKGRGFMPVVAGLAIPKTAPDKRAAEALVDYLTRPEVQ
LLTLKEVGFFPVVRARYGEDLPEGIRLLAEAVSAQSSAKDALPSLLPVGLGDKGGEFNKVYRDAFTRIVLRGEEIRRALD
LEAQNLARILRETGAPCWPPDAPSTGACPVE

Sequences:

>Translated_431_residues
MLSPKERRWSVRKAGFLAFLLASSLGLAQGVVFLSTQLRPIEEAQKMRQVILKGFSGQVQFVPEDYPVWLNRVLAEAQTG
RGTVGVLGGLHGDFPPLVSRGLLEPLDGLYARLQDRGFPQAFVELGRMGTPNQQYLPWMQATYVMVARKEALKYLPPGAD
LNALTYEDLKNWAKAIQEATGQRRLGFPAGPGGLIHRFLQGYLYPSYTGSQVRRFKSPEAEAMWRDFRELWRYVNPRSTA
YEFMQEPLLSGEVWIAWDHTARLKDALVQRPQDFVAFPAPAGPKGRGFMPVVAGLAIPKTAPDKRAAEALVDYLTRPEVQ
LLTLKEVGFFPVVRARYGEDLPEGIRLLAEAVSAQSSAKDALPSLLPVGLGDKGGEFNKVYRDAFTRIVLRGEEIRRALD
LEAQNLARILRETGAPCWPPDAPSTGACPVE
>Mature_431_residues
MLSPKERRWSVRKAGFLAFLLASSLGLAQGVVFLSTQLRPIEEAQKMRQVILKGFSGQVQFVPEDYPVWLNRVLAEAQTG
RGTVGVLGGLHGDFPPLVSRGLLEPLDGLYARLQDRGFPQAFVELGRMGTPNQQYLPWMQATYVMVARKEALKYLPPGAD
LNALTYEDLKNWAKAIQEATGQRRLGFPAGPGGLIHRFLQGYLYPSYTGSQVRRFKSPEAEAMWRDFRELWRYVNPRSTA
YEFMQEPLLSGEVWIAWDHTARLKDALVQRPQDFVAFPAPAGPKGRGFMPVVAGLAIPKTAPDKRAAEALVDYLTRPEVQ
LLTLKEVGFFPVVRARYGEDLPEGIRLLAEAVSAQSSAKDALPSLLPVGLGDKGGEFNKVYRDAFTRIVLRGEEIRRALD
LEAQNLARILRETGAPCWPPDAPSTGACPVE

Specific function: Unknown

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47890; Mature: 47890

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCC
>Mature Secondary Structure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CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA