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The map label for this gene is ygjK [C]

Identifier: 55980947

GI number: 55980947

Start: 921176

End: 922438

Strand: Reverse

Name: ygjK [C]

Synonym: TTHA0978

Alternate gene names: 55980947

Gene position: 922438-921176 (Counterclockwise)

Preceding gene: 55980948

Following gene: 55980946

Centisome position: 49.87

GC content: 69.68

Gene sequence:

>1263_bases
GTGGCGCCTTTGAGGACGAAGGCGGTGGAGGTCCTCCAGCGCAACAGCCGGGGGGCCTTCACCGTCCCCGCGCACGGGCT
CTACCCTTACCAGTGGCTTTGGGACTCGGCCTTCATCGCCCTGGGGTGGACCCAGGTGGACTGGGAGCGGGCCTGGCAGG
AGCTCCTCTGCCTCTTTGACTACGGCCAAGGCCCGGACGGGATGCTCCCCCACATCGTCTTCCACGAGCAGAGCCGGGAC
TACTTCCCCGGCCCCGACGTCTGGGGCCGGGAGGCCCGGGCCCAGCCCGCCACCTCCGGCATCACCCAGCCCCCGGTGGT
GGCCACGGTGGTCCGCTACCTCTACGAGAAGGACCCGGACCGGGACCGGGCCCGGGAGCGGGCCCGGTACCTCTTTCCCA
AGCTCCTCGCCTTCCACCGCTGGCTCTACCACGCCCGCGACCCCTACCGCACCGGCCTCGTGGTCATCGTCCACCCCTGG
GAGTCGGGCATGGACAACAGCCCAGCCTGGGACAAGCCCCTGAGCCGGGTGCCCGTGGAGAACCTCCCCCCCTACGAGCG
GCGGGACGTGAAGCACGTGAACCCCGAGGAGCGGCCCAGGAAGGAGGACTACGACCGCTACCTCTCCCTCCTCTACCTCT
TCCGCCGCCTGGAGTACGACCCCCGGGAGATCTACCGCCAGTCCCCCTTCAAGGTGGTGGACGTGGGGTTCAACGCCATC
CTCCAGCGGGCCAACCGGGACCTCTACGCCCTCGCCGTCCTCCTTCAGGAGGACCCCTACGAGATTGAGGAGTGGATCGT
GCGGGGGGAGGTGGGCCTCGAGGCCCTCTGGGACCGGGAGGCGGGGTTTTACTTCTCCTGGGACCTCGTGGCCGGGGAGC
CCATCGCGGTGAAGACCTCCGCGGGCTTCCTGCCCCTCTTCGCCGGAACGCCCCACCAGGGGCGGGCAAGCCTCCTCGCC
CAAGAGGCGGAGCGCTGGGGGGAAAAGGCGCGCTACCTCCTTCCCAGCGTGGACCCCACGAGCCCCTTCTTTGAACCCGG
GCGGTACTGGCGGGGCCCGGTGTGGATCAACGTCAACTGGATGGTGGCCGAGGGGTTTAGGGACTACGGTTTCGCCGCCC
TGGCGGCAAGGCTCAAGGCGGACGCCCTCGCCCTCATGGAGCGGGAGGGCTTCCGGGAGTACTACGACCCCCTTACGGGG
CAGGGGAGGGGGGGTGAGGGCTTCTCCTGGAGCGCCGCCTTGGCCCTCTTCTGGACGCGATGA

Upstream 100 bases:

>100_bases
CCAGAACCTCGCCCGCATCCTCCGGGAGACGGGCGCCCCCTGCTGGCCGCCCGACGCCCCGAGCACGGGCGCCTGCCCCG
TGGAGTGATAGATTGAGCCC

Downstream 100 bases:

>100_bases
AGGACCGGTACCTTCCTTACCTTCTGATCCTTCCCTCCGTCCTCTTCCTCCTGGTCTTCTTCGGCTGGCCCCTCCTCAGC
GCCCTGGTCCTCGCCTTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MAPLRTKAVEVLQRNSRGAFTVPAHGLYPYQWLWDSAFIALGWTQVDWERAWQELLCLFDYGQGPDGMLPHIVFHEQSRD
YFPGPDVWGREARAQPATSGITQPPVVATVVRYLYEKDPDRDRARERARYLFPKLLAFHRWLYHARDPYRTGLVVIVHPW
ESGMDNSPAWDKPLSRVPVENLPPYERRDVKHVNPEERPRKEDYDRYLSLLYLFRRLEYDPREIYRQSPFKVVDVGFNAI
LQRANRDLYALAVLLQEDPYEIEEWIVRGEVGLEALWDREAGFYFSWDLVAGEPIAVKTSAGFLPLFAGTPHQGRASLLA
QEAERWGEKARYLLPSVDPTSPFFEPGRYWRGPVWINVNWMVAEGFRDYGFAALAARLKADALALMEREGFREYYDPLTG
QGRGGEGFSWSAALALFWTR

Sequences:

>Translated_420_residues
MAPLRTKAVEVLQRNSRGAFTVPAHGLYPYQWLWDSAFIALGWTQVDWERAWQELLCLFDYGQGPDGMLPHIVFHEQSRD
YFPGPDVWGREARAQPATSGITQPPVVATVVRYLYEKDPDRDRARERARYLFPKLLAFHRWLYHARDPYRTGLVVIVHPW
ESGMDNSPAWDKPLSRVPVENLPPYERRDVKHVNPEERPRKEDYDRYLSLLYLFRRLEYDPREIYRQSPFKVVDVGFNAI
LQRANRDLYALAVLLQEDPYEIEEWIVRGEVGLEALWDREAGFYFSWDLVAGEPIAVKTSAGFLPLFAGTPHQGRASLLA
QEAERWGEKARYLLPSVDPTSPFFEPGRYWRGPVWINVNWMVAEGFRDYGFAALAARLKADALALMEREGFREYYDPLTG
QGRGGEGFSWSAALALFWTR
>Mature_419_residues
APLRTKAVEVLQRNSRGAFTVPAHGLYPYQWLWDSAFIALGWTQVDWERAWQELLCLFDYGQGPDGMLPHIVFHEQSRDY
FPGPDVWGREARAQPATSGITQPPVVATVVRYLYEKDPDRDRARERARYLFPKLLAFHRWLYHARDPYRTGLVVIVHPWE
SGMDNSPAWDKPLSRVPVENLPPYERRDVKHVNPEERPRKEDYDRYLSLLYLFRRLEYDPREIYRQSPFKVVDVGFNAIL
QRANRDLYALAVLLQEDPYEIEEWIVRGEVGLEALWDREAGFYFSWDLVAGEPIAVKTSAGFLPLFAGTPHQGRASLLAQ
EAERWGEKARYLLPSVDPTSPFFEPGRYWRGPVWINVNWMVAEGFRDYGFAALAARLKADALALMEREGFREYYDPLTGQ
GRGGEGFSWSAALALFWTR

Specific function: Unknown

COG id: COG3408

COG function: function code G; Glycogen debranching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48781; Mature: 48649

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPLRTKAVEVLQRNSRGAFTVPAHGLYPYQWLWDSAFIALGWTQVDWERAWQELLCLFD
CCCHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHCCEEEEECCEECCHHHHHHHHHHHHH
YGQGPDGMLPHIVFHEQSRDYFPGPDVWGREARAQPATSGITQPPVVATVVRYLYEKDPD
CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
RDRARERARYLFPKLLAFHRWLYHARDPYRTGLVVIVHPWESGMDNSPAWDKPLSRVPVE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHCCCCC
NLPPYERRDVKHVNPEERPRKEDYDRYLSLLYLFRRLEYDPREIYRQSPFKVVDVGFNAI
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEHHHHHH
LQRANRDLYALAVLLQEDPYEIEEWIVRGEVGLEALWDREAGFYFSWDLVAGEPIAVKTS
HHHHCCCEEEEEEHHCCCCHHHHHHHHHCCCCHHHHHCCCCCEEEEEEEECCCCEEEEEC
AGFLPLFAGTPHQGRASLLAQEAERWGEKARYLLPSVDPTSPFFEPGRYWRGPVWINVNW
CCCEEEECCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCEECCEEEEEEEE
MVAEGFRDYGFAALAARLKADALALMEREGFREYYDPLTGQGRGGEGFSWSAALALFWTR
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEEEEECC
>Mature Secondary Structure 
APLRTKAVEVLQRNSRGAFTVPAHGLYPYQWLWDSAFIALGWTQVDWERAWQELLCLFD
CCHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHCCEEEEECCEECCHHHHHHHHHHHHH
YGQGPDGMLPHIVFHEQSRDYFPGPDVWGREARAQPATSGITQPPVVATVVRYLYEKDPD
CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
RDRARERARYLFPKLLAFHRWLYHARDPYRTGLVVIVHPWESGMDNSPAWDKPLSRVPVE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHCCCCC
NLPPYERRDVKHVNPEERPRKEDYDRYLSLLYLFRRLEYDPREIYRQSPFKVVDVGFNAI
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEHHHHHH
LQRANRDLYALAVLLQEDPYEIEEWIVRGEVGLEALWDREAGFYFSWDLVAGEPIAVKTS
HHHHCCCEEEEEEHHCCCCHHHHHHHHHCCCCHHHHHCCCCCEEEEEEEECCCCEEEEEC
AGFLPLFAGTPHQGRASLLAQEAERWGEKARYLLPSVDPTSPFFEPGRYWRGPVWINVNW
CCCEEEECCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCEECCEEEEEEEE
MVAEGFRDYGFAALAARLKADALALMEREGFREYYDPLTGQGRGGEGFSWSAALALFWTR
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA