| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
Click here to switch to the map view.
The map label for this gene is recX [H]
Identifier: 55980817
GI number: 55980817
Start: 812513
End: 812941
Strand: Direct
Name: recX [H]
Synonym: TTHA0848
Alternate gene names: 55980817
Gene position: 812513-812941 (Clockwise)
Preceding gene: 55980809
Following gene: 55980818
Centisome position: 43.93
GC content: 74.13
Gene sequence:
>429_bases ATGGGGAGCGAGGCTTTGGCGTACGCCCTCCGCCTTCTCGCCCGCAAGGGGTACAGCCGGGCGGTCCTGAGGGCGAAGCT TGCCGCCCGCTTCGGCGAGGCGGAGGCCGAGGCGGCCCTCGGGCGCCTGGAGGCCATGGGCTACCTGGACGACCGGGCCT ACGCCCGCGCCTTCGTGGAGACCCGGGCCCGGCGGTACGGCCCGAGGAAGCTTAGGGCCCTTCTCCTCGCCCGGGGGGTG CCGGAGGAGGTGGTGGAGGAGGTCCTGCCCGAGGCCCGGGTGGAGGAGGCCTTGGCGGTCCTCCGCCGCTACCGCCACCG GGAAGACAAGGCCCGGGCGGTCCGCTTCCTCGAGGGGCGGGGCTTTCCCCTGGGGGTGGCCCTGGAGGCCTGGCGGCTTG CCCAGGAGGAGGGGGAAGGGTATAAGTAG
Upstream 100 bases:
>100_bases CCTTCCCAGCCCGCTCCGAAGACGGTCATGGGCTTGGGGTGGACCCGGGAGAGGTGGGGGTCGGCGATGGCGTAGACGCG CATGGCCCTAAGATTATCCC
Downstream 100 bases:
>100_bases GCCATGCCCGAGGTACGCGCCGAGCGCTACATCCCGGCCCCGCCCGAGCGGGTTTACCGGCTCGCCAAGGACCTGGAGGG GCTCAAGCCCTACCTGAAGG
Product: recombination regulator RecX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MGSEALAYALRLLARKGYSRAVLRAKLAARFGEAEAEAALGRLEAMGYLDDRAYARAFVETRARRYGPRKLRALLLARGV PEEVVEEVLPEARVEEALAVLRRYRHREDKARAVRFLEGRGFPLGVALEAWRLAQEEGEGYK
Sequences:
>Translated_142_residues MGSEALAYALRLLARKGYSRAVLRAKLAARFGEAEAEAALGRLEAMGYLDDRAYARAFVETRARRYGPRKLRALLLARGV PEEVVEEVLPEARVEEALAVLRRYRHREDKARAVRFLEGRGFPLGVALEAWRLAQEEGEGYK >Mature_141_residues GSEALAYALRLLARKGYSRAVLRAKLAARFGEAEAEAALGRLEAMGYLDDRAYARAFVETRARRYGPRKLRALLLARGVP EEVVEEVLPEARVEEALAVLRRYRHREDKARAVRFLEGRGFPLGVALEAWRLAQEEGEGYK
Specific function: Modulates recA activity [H]
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003783 [H]
Pfam domain/function: PF02631 RecX [H]
EC number: NA
Molecular weight: Translated: 16017; Mature: 15885
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSEALAYALRLLARKGYSRAVLRAKLAARFGEAEAEAALGRLEAMGYLDDRAYARAFVE CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRARRYGPRKLRALLLARGVPEEVVEEVLPEARVEEALAVLRRYRHREDKARAVRFLEGR HHHHHCCHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GFPLGVALEAWRLAQEEGEGYK CCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure GSEALAYALRLLARKGYSRAVLRAKLAARFGEAEAEAALGRLEAMGYLDDRAYARAFVE CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRARRYGPRKLRALLLARGVPEEVVEEVLPEARVEEALAVLRRYRHREDKARAVRFLEGR HHHHHCCHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GFPLGVALEAWRLAQEEGEGYK CCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA