Click here to switch to the map view.

The map label for this gene is 55980818

Identifier: 55980818

GI number: 55980818

Start: 812945

End: 813388

Strand: Direct

Name: 55980818

Synonym: TTHA0849

Alternate gene names: NA

Gene position: 812945-813388 (Clockwise)

Preceding gene: 55980817

Following gene: 55980819

Centisome position: 43.95

GC content: 66.89

Gene sequence:

>444_bases
ATGCCCGAGGTACGCGCCGAGCGCTACATCCCGGCCCCGCCCGAGCGGGTTTACCGGCTCGCCAAGGACCTGGAGGGGCT
CAAGCCCTACCTGAAGGAGGTGGAGAGCCTCGAGGTGGTGGCCCGGGAAGGCGCCCGCACGAGGAGCCGGTGGGTGGCGG
TGGCCATGGGGAAGAAGGTCCGCTGGCTGGAGGAGGAGGAGTGGGACGACGAGAACCTCAGGAACCGCTTCTTCTCCCCC
GAGGGGGACTTTGACCGCTACGAGGGCACCTGGGTCTTCCTCCCGGAAGGGGAGGGGACCCGGGTGGTCCTCACCCTCAC
CTACGAGCTCACCATCCCCATCTTCGGCGGGCTTTTGCGGAAGCTCGTGCAGAAGCTCATGCAGGAGAACGTGGAAAGCC
TCCTCAAGGGACTGGAGGAGCGGGTCCTGGCCGCTTCCTCTTGA

Upstream 100 bases:

>100_bases
CCGGGCGGTCCGCTTCCTCGAGGGGCGGGGCTTTCCCCTGGGGGTGGCCCTGGAGGCCTGGCGGCTTGCCCAGGAGGAGG
GGGAAGGGTATAAGTAGGCC

Downstream 100 bases:

>100_bases
ACCGGGAGGGCCTCTGCTCTAGGATGGACCTGAGCCGCCCCAAGACGCTTTGAGGGTGGCCGGGAGCTCATAGGAGGTCA
AAGTGGAAACGCTGCGCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: Polyketide Cyclase/Dehydrase

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MPEVRAERYIPAPPERVYRLAKDLEGLKPYLKEVESLEVVAREGARTRSRWVAVAMGKKVRWLEEEEWDDENLRNRFFSP
EGDFDRYEGTWVFLPEGEGTRVVLTLTYELTIPIFGGLLRKLVQKLMQENVESLLKGLEERVLAASS

Sequences:

>Translated_147_residues
MPEVRAERYIPAPPERVYRLAKDLEGLKPYLKEVESLEVVAREGARTRSRWVAVAMGKKVRWLEEEEWDDENLRNRFFSP
EGDFDRYEGTWVFLPEGEGTRVVLTLTYELTIPIFGGLLRKLVQKLMQENVESLLKGLEERVLAASS
>Mature_146_residues
PEVRAERYIPAPPERVYRLAKDLEGLKPYLKEVESLEVVAREGARTRSRWVAVAMGKKVRWLEEEEWDDENLRNRFFSPE
GDFDRYEGTWVFLPEGEGTRVVLTLTYELTIPIFGGLLRKLVQKLMQENVESLLKGLEERVLAASS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17085; Mature: 16954

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEVRAERYIPAPPERVYRLAKDLEGLKPYLKEVESLEVVAREGARTRSRWVAVAMGKKV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
RWLEEEEWDDENLRNRFFSPEGDFDRYEGTWVFLPEGEGTRVVLTLTYELTIPIFGGLLR
CCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEEHHHHHHHHHH
KLVQKLMQENVESLLKGLEERVLAASS
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PEVRAERYIPAPPERVYRLAKDLEGLKPYLKEVESLEVVAREGARTRSRWVAVAMGKKV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
RWLEEEEWDDENLRNRFFSPEGDFDRYEGTWVFLPEGEGTRVVLTLTYELTIPIFGGLLR
CCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEEHHHHHHHHHH
KLVQKLMQENVESLLKGLEERVLAASS
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA