Click here to switch to the map view.

The map label for this gene is rimP

Identifier: 55980671

GI number: 55980671

Start: 665497

End: 665970

Strand: Reverse

Name: rimP

Synonym: TTHA0702

Alternate gene names: 55980671

Gene position: 665970-665497 (Counterclockwise)

Preceding gene: 55980677

Following gene: 55980670

Centisome position: 36.0

GC content: 69.2

Gene sequence:

>474_bases
GTGGGTGTAAACCCACCCTTCCTTTGTGAAGGGGGCGGGGAGGTGACCGTGGACCTTTGGCAGCTGGTGGAAGAGGCGGT
TTCGCCCCTGGGGCTGGACGTCCTCGAGGTCCACTTCGCCCGGGGCGAGCTCCTCGTCCGCCTGGAGCGGAAGGACGAGC
GCCCCATCACCGTGGCCGACCTGGAGGAGGCGAGCCGCCACATCGAGGCCGCCCTAGACCGGGAGGACCCCATCCCGGGA
AGCTACCGGCTTTTGGTGGAGTCCCCGGGGCCCAAAAGGCCCCTCTTCACCCGGCGGCACTTTGAGCGGTTCCAGGGCCT
CAAGGCCAAGGTTCCGGGTCCCGAGGGGTTCACGGGGCGGATCCTCCGGGTGGAGGGGGAGGAGGTGGTCTTCCAGGTGG
GCGACGAGGAGCGGCGCCTTAGGATCGGCACCTTCCGGGCCAACCTGGCGGAGTGGCCCGAGGAGCCCAGGTAA

Upstream 100 bases:

>100_bases
CCGGGCTCGGACCGGACCAGCCTTGAGTATACCGGACTAAAGGGGTTGTAGTCAAGGAGGGGGAAGGTGTAGACTAAGGG
CAGTGCTCCCAAGGGCGGGG

Downstream 100 bases:

>100_bases
AGGGAGGTAAAAAGCGATGAACAGGGAGTTCGTGGAAGCCATGCAGCACCTGGCCCTGGAGCGCGGGGTCAGCGTGGAGG
AGATCCTGGAGGCCTTCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MGVNPPFLCEGGGEVTVDLWQLVEEAVSPLGLDVLEVHFARGELLVRLERKDERPITVADLEEASRHIEAALDREDPIPG
SYRLLVESPGPKRPLFTRRHFERFQGLKAKVPGPEGFTGRILRVEGEEVVFQVGDEERRLRIGTFRANLAEWPEEPR

Sequences:

>Translated_157_residues
MGVNPPFLCEGGGEVTVDLWQLVEEAVSPLGLDVLEVHFARGELLVRLERKDERPITVADLEEASRHIEAALDREDPIPG
SYRLLVESPGPKRPLFTRRHFERFQGLKAKVPGPEGFTGRILRVEGEEVVFQVGDEERRLRIGTFRANLAEWPEEPR
>Mature_156_residues
GVNPPFLCEGGGEVTVDLWQLVEEAVSPLGLDVLEVHFARGELLVRLERKDERPITVADLEEASRHIEAALDREDPIPGS
YRLLVESPGPKRPLFTRRHFERFQGLKAKVPGPEGFTGRILRVEGEEVVFQVGDEERRLRIGTFRANLAEWPEEPR

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=140, Percent_Identity=34.2857142857143, Blast_Score=71, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_THET2 (Q72KG3)

Other databases:

- EMBL:   AE017221
- RefSeq:   YP_004325.1
- ProteinModelPortal:   Q72KG3
- SMR:   Q72KG3
- STRING:   Q72KG3
- GeneID:   2774786
- GenomeReviews:   AE017221_GR
- eggNOG:   COG0779
- HOGENOM:   HBG668072
- OMA:   FTAPIKA
- PhylomeDB:   Q72KG3
- ProtClustDB:   PRK14645
- BioCyc:   TTHE262724:TT_C0350-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 17790; Mature: 17659

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVNPPFLCEGGGEVTVDLWQLVEEAVSPLGLDVLEVHFARGELLVRLERKDERPITVAD
CCCCCCEEECCCCEEEHHHHHHHHHHHCCCCCHHHEEEECCCEEEEEEECCCCCCEEEEC
LEEASRHIEAALDREDPIPGSYRLLVESPGPKRPLFTRRHFERFQGLKAKVPGPEGFTGR
HHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCEEECCCCCCCCCE
ILRVEGEEVVFQVGDEERRLRIGTFRANLAEWPEEPR
EEEEECCEEEEEECCCCCEEEEEEEECHHHCCCCCCC
>Mature Secondary Structure 
GVNPPFLCEGGGEVTVDLWQLVEEAVSPLGLDVLEVHFARGELLVRLERKDERPITVAD
CCCCCEEECCCCEEEHHHHHHHHHHHCCCCCHHHEEEECCCEEEEEEECCCCCCEEEEC
LEEASRHIEAALDREDPIPGSYRLLVESPGPKRPLFTRRHFERFQGLKAKVPGPEGFTGR
HHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCEEECCCCCCCCCE
ILRVEGEEVVFQVGDEERRLRIGTFRANLAEWPEEPR
EEEEECCEEEEEECCCCCEEEEEEEECHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA