| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980651
Identifier: 55980651
GI number: 55980651
Start: 646832
End: 647983
Strand: Reverse
Name: 55980651
Synonym: TTHA0682
Alternate gene names: NA
Gene position: 647983-646832 (Counterclockwise)
Preceding gene: 55980652
Following gene: 55980650
Centisome position: 35.03
GC content: 77.78
Gene sequence:
>1152_bases GTGGTGCGCTACGAGCCCGCCCTCCCCCTTCCCAGCTACACGGTGCGCCTCGCGCCCGTGCCCGTGGAGGCCGTCAGAGA AGAGGCCAAGCCCCAAGCCCCCATCCCTGAGGCCAGGCCCGCCGAGGCCTCGAGGCCCCAGACGCCCCCACCCCAACCCG CCCCCCAGGCCCGGGTGAACCCCACGCCCCCCCGGGGTCTGGAGCGCGCCCCCATCGCCTCCGGGGGTGAGGAGCGCCTC CTCCCCTCTCCCTCCCCCGCCCCCCGGGCCCAAGCCGAGGCCCTCCCCGCCCCAAGCCGGGAAGAAGCCTCCCTGGCCCA GGAGGCCGCCCCGCCTCGGGAAGCCCCCGCCCTAGGCCGGGAGGCCAGCCCCGCCGAGCCCCTGGCCCGGGGCACGGGGG GCCTCGAGGCCGCCCGCCCGGCCCAGGAGGCCTTCGCCGCCCCCGCCCCCGAGGCCCAGGCCCCCACGGCGGAGGAGGCG GGAGCCTCTTCCTGGGGCCAAGCGGCCGCCCCCGCCCCGGCGGAGGCCTTGGCGCCTACGCCTTCCGCCCCGACCCCTGC GAAGGCGGAGGCCCTGGCCCCTTCTTCCTCCGGCGGAGGGCTTGCGGCGGAGAAGGCCCCGCCCGCGCCCGGCACCCCGA ACCCGCTTCCCCTCCCGGCCCAGGCCCCCGGGGCCCTGCCGGAGGGAAGGATGGGCCCCGCCCGGGAGGCCGCCCTCCCC CCCTCCCGCCCGGCGGGGGAGCTGGGCCGGGAAGGCCTCCTCCCCCCGGGCGGGGTCCAAGGGGGGAGGGACTGGGGGCG GTGCGCCGTGGTGGTGGACGCCACCCCCTTCCCCCTGGACCCGAACCCCAACCCCCAGGTCCTCACGCCCGAGGGGAAGC GGGTCTGGCCCCCCGCGGCCAAGGTGCAGGGGGTGCCCACGGAGGTGGTGGACCGGAGCGGCATCGCCCTCTTCTTCCCC CAGGGCGCCTTTGACCCCGCGCCCTACGGGCGGGTCCTTTGGGTCAAGGCCTTGGGTACCCGGACGCGGACGCCGGAAAG CCGGTTCCACGACCTCGTGGTGGTAAGCGCAGAGGACGCCGCCCGCATCCAGGTGGCGGCGGAAAGCCTCTGCGAGATGG TCTTCCTGTACGCGAAAGGAGGTCAGCCGTGA
Upstream 100 bases:
>100_bases GTGCGCCGCGCGGGGGGGGAGAAGGTTGAGGTGGGCGTCCGGCCTTGAGCGGAGGGCCTTCCTCCTCGCCCTCCTGGTCC ACGGCCTCCTCCTCCTTGGG
Downstream 100 bases:
>100_bases GAAGAGGCCTAGCGGTTCTGCTTCCCTTCCTTCCTTTAGCCCTCGCCTGGCAGCCCGCCCTGGACCTGGAGCTCGCCCGG CAGGTGGTGGACGGGGCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MVRYEPALPLPSYTVRLAPVPVEAVREEAKPQAPIPEARPAEASRPQTPPPQPAPQARVNPTPPRGLERAPIASGGEERL LPSPSPAPRAQAEALPAPSREEASLAQEAAPPREAPALGREASPAEPLARGTGGLEAARPAQEAFAAPAPEAQAPTAEEA GASSWGQAAAPAPAEALAPTPSAPTPAKAEALAPSSSGGGLAAEKAPPAPGTPNPLPLPAQAPGALPEGRMGPAREAALP PSRPAGELGREGLLPPGGVQGGRDWGRCAVVVDATPFPLDPNPNPQVLTPEGKRVWPPAAKVQGVPTEVVDRSGIALFFP QGAFDPAPYGRVLWVKALGTRTRTPESRFHDLVVVSAEDAARIQVAAESLCEMVFLYAKGGQP
Sequences:
>Translated_383_residues MVRYEPALPLPSYTVRLAPVPVEAVREEAKPQAPIPEARPAEASRPQTPPPQPAPQARVNPTPPRGLERAPIASGGEERL LPSPSPAPRAQAEALPAPSREEASLAQEAAPPREAPALGREASPAEPLARGTGGLEAARPAQEAFAAPAPEAQAPTAEEA GASSWGQAAAPAPAEALAPTPSAPTPAKAEALAPSSSGGGLAAEKAPPAPGTPNPLPLPAQAPGALPEGRMGPAREAALP PSRPAGELGREGLLPPGGVQGGRDWGRCAVVVDATPFPLDPNPNPQVLTPEGKRVWPPAAKVQGVPTEVVDRSGIALFFP QGAFDPAPYGRVLWVKALGTRTRTPESRFHDLVVVSAEDAARIQVAAESLCEMVFLYAKGGQP >Mature_383_residues MVRYEPALPLPSYTVRLAPVPVEAVREEAKPQAPIPEARPAEASRPQTPPPQPAPQARVNPTPPRGLERAPIASGGEERL LPSPSPAPRAQAEALPAPSREEASLAQEAAPPREAPALGREASPAEPLARGTGGLEAARPAQEAFAAPAPEAQAPTAEEA GASSWGQAAAPAPAEALAPTPSAPTPAKAEALAPSSSGGGLAAEKAPPAPGTPNPLPLPAQAPGALPEGRMGPAREAALP PSRPAGELGREGLLPPGGVQGGRDWGRCAVVVDATPFPLDPNPNPQVLTPEGKRVWPPAAKVQGVPTEVVDRSGIALFFP QGAFDPAPYGRVLWVKALGTRTRTPESRFHDLVVVSAEDAARIQVAAESLCEMVFLYAKGGQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39194; Mature: 39194
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRYEPALPLPSYTVRLAPVPVEAVREEAKPQAPIPEARPAEASRPQTPPPQPAPQARVN CCCCCCCCCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PTPPRGLERAPIASGGEERLLPSPSPAPRAQAEALPAPSREEASLAQEAAPPREAPALGR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCCCCCCCCC EASPAEPLARGTGGLEAARPAQEAFAAPAPEAQAPTAEEAGASSWGQAAAPAPAEALAPT CCCCCCHHHHCCCCCCHHCHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHCCCC PSAPTPAKAEALAPSSSGGGLAAEKAPPAPGTPNPLPLPAQAPGALPEGRMGPAREAALP CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCC PSRPAGELGREGLLPPGGVQGGRDWGRCAVVVDATPFPLDPNPNPQVLTPEGKRVWPPAA CCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEECCCCCEECCCHH KVQGVPTEVVDRSGIALFFPQGAFDPAPYGRVLWVKALGTRTRTPESRFHDLVVVSAEDA HHCCCCHHHHCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCCCHHHCCEEEEECCCCC ARIQVAAESLCEMVFLYAKGGQP HHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVRYEPALPLPSYTVRLAPVPVEAVREEAKPQAPIPEARPAEASRPQTPPPQPAPQARVN CCCCCCCCCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PTPPRGLERAPIASGGEERLLPSPSPAPRAQAEALPAPSREEASLAQEAAPPREAPALGR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCCCCCCCCC EASPAEPLARGTGGLEAARPAQEAFAAPAPEAQAPTAEEAGASSWGQAAAPAPAEALAPT CCCCCCHHHHCCCCCCHHCHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHCCCC PSAPTPAKAEALAPSSSGGGLAAEKAPPAPGTPNPLPLPAQAPGALPEGRMGPAREAALP CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCC PSRPAGELGREGLLPPGGVQGGRDWGRCAVVVDATPFPLDPNPNPQVLTPEGKRVWPPAA CCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEECCCCCEECCCHH KVQGVPTEVVDRSGIALFFPQGAFDPAPYGRVLWVKALGTRTRTPESRFHDLVVVSAEDA HHCCCCHHHHCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCCCHHHCCEEEEECCCCC ARIQVAAESLCEMVFLYAKGGQP HHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA