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The map label for this gene is 55980652

Identifier: 55980652

GI number: 55980652

Start: 648036

End: 648413

Strand: Reverse

Name: 55980652

Synonym: TTHA0683

Alternate gene names: NA

Gene position: 648413-648036 (Counterclockwise)

Preceding gene: 55980653

Following gene: 55980651

Centisome position: 35.05

GC content: 73.54

Gene sequence:

>378_bases
GTGAGCCGGCGGCCCCTGGTCCTGAACCTCATCCCCCTCATTGACTTCTTCCTCCTCCTCGCCCTCTTCGCCCTCCTCCT
CGCCCGCTGGCCCGAGGCCCTACCCCAGCGGGCCCTCTCCGTGGACCTTCCCCGGGCGGAGGGGAGGCAGGGTAGCGGGG
GGGTGCTCCTGGAGCTGGACCGGGAAGGACGCCTTGCCCTGAACGGGAAGCCCGTGGCCCTAAAGGACCTGGCCCAGGCC
CTGAGCCCCCTCCTCCAGGAGGGGACGGCGGTCCGCCTCGAGGCGGACCGGGAGGTGCCCCACGGCACGGTGGTGGCCGT
GCTGGAGGCGGTGCGCCGCGCGGGGGGGGAGAAGGTTGAGGTGGGCGTCCGGCCTTGA

Upstream 100 bases:

>100_bases
GCATCGCCGAGGCCCTCACCAACACCGGGATGGGCCTTTTCGTGGCCGTGGTGGCCTACGGGGGGCGGGTGCTCCTTGGG
GCCATGGAGGGGGGGGAAGA

Downstream 100 bases:

>100_bases
GCGGAGGGCCTTCCTCCTCGCCCTCCTGGTCCACGGCCTCCTCCTCCTTGGGGTGGTGCGCTACGAGCCCGCCCTCCCCC
TTCCCAGCTACACGGTGCGC

Product: TolR-type transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MSRRPLVLNLIPLIDFFLLLALFALLLARWPEALPQRALSVDLPRAEGRQGSGGVLLELDREGRLALNGKPVALKDLAQA
LSPLLQEGTAVRLEADREVPHGTVVAVLEAVRRAGGEKVEVGVRP

Sequences:

>Translated_125_residues
MSRRPLVLNLIPLIDFFLLLALFALLLARWPEALPQRALSVDLPRAEGRQGSGGVLLELDREGRLALNGKPVALKDLAQA
LSPLLQEGTAVRLEADREVPHGTVVAVLEAVRRAGGEKVEVGVRP
>Mature_124_residues
SRRPLVLNLIPLIDFFLLLALFALLLARWPEALPQRALSVDLPRAEGRQGSGGVLLELDREGRLALNGKPVALKDLAQAL
SPLLQEGTAVRLEADREVPHGTVVAVLEAVRRAGGEKVEVGVRP

Specific function: Unknown

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13512; Mature: 13381

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRPLVLNLIPLIDFFLLLALFALLLARWPEALPQRALSVDLPRAEGRQGSGGVLLELD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEC
REGRLALNGKPVALKDLAQALSPLLQEGTAVRLEADREVPHGTVVAVLEAVRRAGGEKVE
CCCCEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEE
VGVRP
ECCCC
>Mature Secondary Structure 
SRRPLVLNLIPLIDFFLLLALFALLLARWPEALPQRALSVDLPRAEGRQGSGGVLLELD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEC
REGRLALNGKPVALKDLAQALSPLLQEGTAVRLEADREVPHGTVVAVLEAVRRAGGEKVE
CCCCEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEE
VGVRP
ECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA