| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is tig [H]
Identifier: 55980583
GI number: 55980583
Start: 583009
End: 584223
Strand: Direct
Name: tig [H]
Synonym: TTHA0614
Alternate gene names: 55980583
Gene position: 583009-584223 (Clockwise)
Preceding gene: 55980582
Following gene: 55980584
Centisome position: 31.52
GC content: 69.63
Gene sequence:
>1215_bases GTGGCGGAGATCCTGGAGCGTTCCGGCTATCTGGTCAAGGTGCGGGTGGAGGTGCCCGCCGACCGGGTGAAGGCGAGCTA CGAGGCCCTGCTTAAGGACCTCGCCTCCCGGGTGCGGGTGCCCGGCTTCCGGCCGGGCAAGGCCCCCCTGAAGGTGGTGG AGGCCCGCCTGGGCCGGGAGGCGCTCCTCCAAGACCTTAAGGAGCGCCTGGTGGAGGAGACCTACCCCGAGGCGGTGCGG GAGCTCGGCCTAAGCCCCGTGGCCGCCCGCGTGGTGGAGCAGGACCTGAGCGAGGGGGAGGGCTTCCGCTACGTGGCCGA GGTGGAGAACTACCCCGAGGTGAGGCTTCCCGACTGGCGGAGCTTCGCCTTGGAGGTCTCCCCGCCCGAGGTCACCGAGG AGATGGTGGAGAAGGCCCTGGAGGAGCTCCGCCAGCGCTACGCCGAGCTCGTCCCCGTGGAGCGGGAGGCCCAGGAAAAG GACCACCTCTTCGTCCGCACCGAGGAGGGGGCGGAGTTCCCCATTGACCTCGCTAAAGCCCTTCCCCACGTGCGGGAGGC CCTCCTCGGCAAGAAGGCGGGGGACGTGGTCATGGTCCCCGTGCTGAACGACAAGGGCGAGAAGGTGCGGGAGGTCAGGA CCGAGGTCCTCGAGGTCAAGACCCTGAAGCTCCCCGAGCTGGACGAGGAGTTCGCCAAGACCCTGGAGGCGGAAAGCCTC GAGGACCTCAAAAACCGGGTGCGGGAAAGCCTCAAGCGCCAGGCGGAGCGGGCCTACGAGGAGGCCAGGGAGCGGGCCTT CTTGGAGAAGCTCGCCGAGGGCCTGGAGGTGGAGATCCCCCCTTCCATGCTCCGGGCGGAGGAGCGCCACCTCCTGGAGC ACCTGGCCGAGGACCTCTACCGGCAGGGGATCAGCCTGGAGGCCTACCTCGAGGCCCTGAAGGAGAAGGGGGAGTTGGAG AAGTTCCAGGAGGACCTGCGCAAGGAGGCGGAGAAGCGGGTCCGCATCGCCCTCGCCCGGGAGAAGCTCGCCGAGGAGCT CAACCCCGAGGTCTCCGAGGAGGAGTGGCAGGCCTACCTCCAGGCCGCGGCCCGGGCCTACGGCGTTGCCGTCCAGGACC TTCGCCGCCAGTTCGGCGAGGAGGGCCTCGCCCGGCTTAAGGAGCGCCTCCGCCAGGACAAGGCGGTGCAGGAGGCCCTG AAGGCCCTGGGCTGA
Upstream 100 bases:
>100_bases ACGCGCCGGACTTAGGATCCGGTGGGGCAACCCGTGCGGGTTCAAGTCCCGCTCCTCGCACCATCCGGGCGGCCCCCCTT TCATCGGGACGAGGTGAAAC
Downstream 100 bases:
>100_bases GGGCCTGGAACATGGTGGCCCAGGGGGGTTTCCCCCCTGGGTCTGCCGCTAAACTAAGGATTGGTATGGTCATACCCTAC GTCATTGAGCAGACGGCCCG
Product: trigger factor
Products: peptidylproline (w =0) [C]
Alternate protein names: TF [H]
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MAEILERSGYLVKVRVEVPADRVKASYEALLKDLASRVRVPGFRPGKAPLKVVEARLGREALLQDLKERLVEETYPEAVR ELGLSPVAARVVEQDLSEGEGFRYVAEVENYPEVRLPDWRSFALEVSPPEVTEEMVEKALEELRQRYAELVPVEREAQEK DHLFVRTEEGAEFPIDLAKALPHVREALLGKKAGDVVMVPVLNDKGEKVREVRTEVLEVKTLKLPELDEEFAKTLEAESL EDLKNRVRESLKRQAERAYEEARERAFLEKLAEGLEVEIPPSMLRAEERHLLEHLAEDLYRQGISLEAYLEALKEKGELE KFQEDLRKEAEKRVRIALAREKLAEELNPEVSEEEWQAYLQAAARAYGVAVQDLRRQFGEEGLARLKERLRQDKAVQEAL KALG
Sequences:
>Translated_404_residues MAEILERSGYLVKVRVEVPADRVKASYEALLKDLASRVRVPGFRPGKAPLKVVEARLGREALLQDLKERLVEETYPEAVR ELGLSPVAARVVEQDLSEGEGFRYVAEVENYPEVRLPDWRSFALEVSPPEVTEEMVEKALEELRQRYAELVPVEREAQEK DHLFVRTEEGAEFPIDLAKALPHVREALLGKKAGDVVMVPVLNDKGEKVREVRTEVLEVKTLKLPELDEEFAKTLEAESL EDLKNRVRESLKRQAERAYEEARERAFLEKLAEGLEVEIPPSMLRAEERHLLEHLAEDLYRQGISLEAYLEALKEKGELE KFQEDLRKEAEKRVRIALAREKLAEELNPEVSEEEWQAYLQAAARAYGVAVQDLRRQFGEEGLARLKERLRQDKAVQEAL KALG >Mature_403_residues AEILERSGYLVKVRVEVPADRVKASYEALLKDLASRVRVPGFRPGKAPLKVVEARLGREALLQDLKERLVEETYPEAVRE LGLSPVAARVVEQDLSEGEGFRYVAEVENYPEVRLPDWRSFALEVSPPEVTEEMVEKALEELRQRYAELVPVEREAQEKD HLFVRTEEGAEFPIDLAKALPHVREALLGKKAGDVVMVPVLNDKGEKVREVRTEVLEVKTLKLPELDEEFAKTLEAESLE DLKNRVRESLKRQAERAYEEARERAFLEKLAEGLEVEIPPSMLRAEERHLLEHLAEDLYRQGISLEAYLEALKEKGELEK FQEDLRKEAEKRVRIALAREKLAEELNPEVSEEEWQAYLQAAARAYGVAVQDLRRQFGEEGLARLKERLRQDKAVQEALK ALG
Specific function: Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation [H]
COG id: COG0544
COG function: function code O; FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PPIase FKBP-type domain [H]
Homologues:
Organism=Escherichia coli, GI1786640, Length=299, Percent_Identity=26.0869565217391, Blast_Score=91, Evalue=1e-19,
Paralogues:
None
Copy number: 1070 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 500 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 340 Molecules/Cell In: Growth-Phase, Mini
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005215 - InterPro: IPR008880 - InterPro: IPR008881 [H]
Pfam domain/function: PF05698 Trigger_C; PF05697 Trigger_N [H]
EC number: NA
Molecular weight: Translated: 46288; Mature: 46157
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEILERSGYLVKVRVEVPADRVKASYEALLKDLASRVRVPGFRPGKAPLKVVEARLGRE CCHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCHH ALLQDLKERLVEETYPEAVRELGLSPVAARVVEQDLSEGEGFRYVAEVENYPEVRLPDWR HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEHHHHCCCCCCCCCCHH SFALEVSPPEVTEEMVEKALEELRQRYAELVPVEREAQEKDHLFVRTEEGAEFPIDLAKA HHEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEECCCCCCCCHHHHHH LPHVREALLGKKAGDVVMVPVLNDKGEKVREVRTEVLEVKTLKLPELDEEFAKTLEAESL HHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH EDLKNRVRESLKRQAERAYEEARERAFLEKLAEGLEVEIPPSMLRAEERHLLEHLAEDLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHH RQGISLEAYLEALKEKGELEKFQEDLRKEAEKRVRIALAREKLAEELNPEVSEEEWQAYL HCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH QAAARAYGVAVQDLRRQFGEEGLARLKERLRQDKAVQEALKALG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AEILERSGYLVKVRVEVPADRVKASYEALLKDLASRVRVPGFRPGKAPLKVVEARLGRE CHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCHH ALLQDLKERLVEETYPEAVRELGLSPVAARVVEQDLSEGEGFRYVAEVENYPEVRLPDWR HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEHHHHCCCCCCCCCCHH SFALEVSPPEVTEEMVEKALEELRQRYAELVPVEREAQEKDHLFVRTEEGAEFPIDLAKA HHEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEECCCCCCCCHHHHHH LPHVREALLGKKAGDVVMVPVLNDKGEKVREVRTEVLEVKTLKLPELDEEFAKTLEAESL HHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH EDLKNRVRESLKRQAERAYEEARERAFLEKLAEGLEVEIPPSMLRAEERHLLEHLAEDLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHH RQGISLEAYLEALKEKGELEKFQEDLRKEAEKRVRIALAREKLAEELNPEVSEEEWQAYL HCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH QAAARAYGVAVQDLRRQFGEEGLARLKERLRQDKAVQEALKALG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: peptidylproline (w =180) [C]
Specific reaction: peptidylproline (w =180) = peptidylproline (w =0) [C]
General reaction: Isomerases; cis-trans-Isomerases [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA