| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is hemH [H]
Identifier: 55980569
GI number: 55980569
Start: 567514
End: 568467
Strand: Reverse
Name: hemH [H]
Synonym: TTHA0600
Alternate gene names: 55980569
Gene position: 568467-567514 (Counterclockwise)
Preceding gene: 55980570
Following gene: 55980568
Centisome position: 30.73
GC content: 69.6
Gene sequence:
>954_bases ATGAACGTCCTGCTCATGGCCTACGGCACCCCTTACGCCCCCGAGGAGGTGGAGCCTTACTACACGGACATCCGCCGGGG GCGCCGCCCCTCGGAGGAGCTCCTCAAGGAGCTCGCCGAGCGGTACGAGGCCATCGGCAAAAGCCCCCTGAACGAGATCA CCCTGGCCCAGGCGGTCCGCCTCCAGGCCCTCCTCAACCTGGAGGCCCCCCCCTACCCCAAGCGCCTCCTGAGCCCCTTC CCTCCCCGCGCCCCCCACGGCCCCGCCCGGGTCTACGTGGGGACGAAGCACTGGCACCCCTCCATCGGGGAGGCGGTGGC CGCCATGCACGAGGACGGGGTGCGGCGGGCCGTGGCCATCGTGGCCGCCCCCCACTACTCCCTGAGGAGCGTGGCCGAGT ACCGGGAGAAGGTGGACTCGGCCCTAAAAGCCCTCCCCGAGCCCATAGACTTCGTATGGGTGGAAAGCTACGAGGCCCAC CCCGGCCTCATCGCCGCCTACGCCCGGAGGCTTGAGGAGGTGATCTGGCGCCTGAAGAACCCGGGGAAGGCGGCCTACGT CTTCACCGCCCACTCCATCCCCCTCTCCGCCGTGGAGAAGGGGGACCCCTACCCCAGGCAGGTGGAGAAGACGGCGGAAC TCATCGCCAAAAAGCTCGCCCTCCCCCGCTTCCACGTGGCCTACCAGTCGGCAGGGCGCACCCCGGAGCCCTGGCTCGGC CCCGACATCAACGAGCTTCTGCGCACGCTGAAGGAGGAGGGGTACGAGGAAGTGGCCGTCCAGGCGGTGGGCTTCCCCGC CGACCACCTGGAGGTCTTCTACGACCTGGACCTCGAGGCCCAGGCCACGGCGAGGGAGCTCGGCCTGAGGCTCCTCAGGG CCCGGAGCCTGAACGCGGACCTGGACTACATCCAAGTCCTCAAGGACCTGGTGGAGGCGGCGTGGCCGAGATAG
Upstream 100 bases:
>100_bases GTAAAAGCGGGCACATCTTCAACCTGGGGCACGGGATCGTGCCCGAGACCCCCGAGGAGAACGTGCGCTACGTGGTAGAA CTCATCCAGGAGGTAGCGGC
Downstream 100 bases:
>100_bases GGGTGGCCGTGGTGGGCGGGGGGTGGGCGGGGCTGGCCGCCGCCCTGGCCCTCAAGGAGGCGGGGGCGGACTTCCTCCTC CTGGAGGCCAGCCTCCGCCT
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MNVLLMAYGTPYAPEEVEPYYTDIRRGRRPSEELLKELAERYEAIGKSPLNEITLAQAVRLQALLNLEAPPYPKRLLSPF PPRAPHGPARVYVGTKHWHPSIGEAVAAMHEDGVRRAVAIVAAPHYSLRSVAEYREKVDSALKALPEPIDFVWVESYEAH PGLIAAYARRLEEVIWRLKNPGKAAYVFTAHSIPLSAVEKGDPYPRQVEKTAELIAKKLALPRFHVAYQSAGRTPEPWLG PDINELLRTLKEEGYEEVAVQAVGFPADHLEVFYDLDLEAQATARELGLRLLRARSLNADLDYIQVLKDLVEAAWPR
Sequences:
>Translated_317_residues MNVLLMAYGTPYAPEEVEPYYTDIRRGRRPSEELLKELAERYEAIGKSPLNEITLAQAVRLQALLNLEAPPYPKRLLSPF PPRAPHGPARVYVGTKHWHPSIGEAVAAMHEDGVRRAVAIVAAPHYSLRSVAEYREKVDSALKALPEPIDFVWVESYEAH PGLIAAYARRLEEVIWRLKNPGKAAYVFTAHSIPLSAVEKGDPYPRQVEKTAELIAKKLALPRFHVAYQSAGRTPEPWLG PDINELLRTLKEEGYEEVAVQAVGFPADHLEVFYDLDLEAQATARELGLRLLRARSLNADLDYIQVLKDLVEAAWPR >Mature_317_residues MNVLLMAYGTPYAPEEVEPYYTDIRRGRRPSEELLKELAERYEAIGKSPLNEITLAQAVRLQALLNLEAPPYPKRLLSPF PPRAPHGPARVYVGTKHWHPSIGEAVAAMHEDGVRRAVAIVAAPHYSLRSVAEYREKVDSALKALPEPIDFVWVESYEAH PGLIAAYARRLEEVIWRLKNPGKAAYVFTAHSIPLSAVEKGDPYPRQVEKTAELIAKKLALPRFHVAYQSAGRTPEPWLG PDINELLRTLKEEGYEEVAVQAVGFPADHLEVFYDLDLEAQATARELGLRLLRARSLNADLDYIQVLKDLVEAAWPR
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499021, Length=285, Percent_Identity=29.1228070175439, Blast_Score=124, Evalue=8e-29, Organism=Homo sapiens, GI60499025, Length=285, Percent_Identity=29.1228070175439, Blast_Score=124, Evalue=8e-29, Organism=Escherichia coli, GI1786681, Length=227, Percent_Identity=24.6696035242291, Blast_Score=62, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6324750, Length=285, Percent_Identity=27.3684210526316, Blast_Score=105, Evalue=1e-23, Organism=Drosophila melanogaster, GI17864156, Length=330, Percent_Identity=25.4545454545455, Blast_Score=98, Evalue=8e-21, Organism=Drosophila melanogaster, GI45552018, Length=172, Percent_Identity=27.906976744186, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24651774, Length=265, Percent_Identity=25.6603773584906, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 35651; Mature: 35651
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVLLMAYGTPYAPEEVEPYYTDIRRGRRPSEELLKELAERYEAIGKSPLNEITLAQAVR CCEEEEECCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LQALLNLEAPPYPKRLLSPFPPRAPHGPARVYVGTKHWHPSIGEAVAAMHEDGVRRAVAI HHHHHCCCCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH VAAPHYSLRSVAEYREKVDSALKALPEPIDFVWVESYEAHPGLIAAYARRLEEVIWRLKN HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCC PGKAAYVFTAHSIPLSAVEKGDPYPRQVEKTAELIAKKLALPRFHVAYQSAGRTPEPWLG CCCEEEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCC PDINELLRTLKEEGYEEVAVQAVGFPADHLEVFYDLDLEAQATARELGLRLLRARSLNAD CCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHEEEECCCCHHHHHHHHHHHHHHHHCCCCC LDYIQVLKDLVEAAWPR HHHHHHHHHHHHHHCCC >Mature Secondary Structure MNVLLMAYGTPYAPEEVEPYYTDIRRGRRPSEELLKELAERYEAIGKSPLNEITLAQAVR CCEEEEECCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LQALLNLEAPPYPKRLLSPFPPRAPHGPARVYVGTKHWHPSIGEAVAAMHEDGVRRAVAI HHHHHCCCCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH VAAPHYSLRSVAEYREKVDSALKALPEPIDFVWVESYEAHPGLIAAYARRLEEVIWRLKN HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCC PGKAAYVFTAHSIPLSAVEKGDPYPRQVEKTAELIAKKLALPRFHVAYQSAGRTPEPWLG CCCEEEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCC PDINELLRTLKEEGYEEVAVQAVGFPADHLEVFYDLDLEAQATARELGLRLLRARSLNAD CCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHEEEECCCCHHHHHHHHHHHHHHHHCCCCC LDYIQVLKDLVEAAWPR HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA