Click here to switch to the map view.

The map label for this gene is 55980481

Identifier: 55980481

GI number: 55980481

Start: 476688

End: 477743

Strand: Reverse

Name: 55980481

Synonym: TTHA0512

Alternate gene names: NA

Gene position: 477743-476688 (Counterclockwise)

Preceding gene: 55980482

Following gene: 55980480

Centisome position: 25.83

GC content: 69.22

Gene sequence:

>1056_bases
ATGACCATCTCCGAGCTGGAGGAAACCCTTAAGGAGGAGGCCCGGCTCTTCCTCAGCCGGGCCCGGGGGCTTAGGGGCCC
CCACACGGAGGACCTCTTCGCCCGCAGGGTGTACATCGGCCCCGAGGACGTGCACGTGGAGAACTACCCCCGCCGCCCGC
TGGCGGTCTTCAACCCCGGGGCGGTGCTGGAGGGGGAGGTGGTCCACCTCTTCCCCCGCCTCGTCTTTGAGTACTACAGC
TACGCCTCCGCCATCGGCCACGCCACCTTGCCCCTAAAGGACCTCCTCGCGGGGCGGATCCCCAAGCCCCTCCCCGTGCG
CATCCTCCTCTACCCCACGGAGCTCTTTGAGGCGGTGCGGGGGTGCGAGGACGCCCGGGCCCACCGCCGGGAGGAGGGGT
ACGCCCTCTTCTACACGGGGGTGGGGAAGCTGGGGGACGCCCGCAACACCGACAGCAAGGAGGTCTTCACCGCCATCCTC
TCCCTGGCGGAGTTTGACGAGGCCTTCCAGCTCAAGCGGAAGGCCCCCATCCGCATCGGCCTCTCCGGGGAGGAGACGGG
GCTTGCCCTCTACCTCCCCACCAAGAACGCCACCTTCCTCGAGGGGGACCACGTCCTCCTCAGGCCCAGCCTCTCGGGCC
TTCCCGACCTCTGCTGGCGGGGCAGGCTGGACCCCAAGACCCTCAAGGCCTACGACCTCCGGCCCGTCCTCGCTCCGGAG
GCCTTTGAGTACAAGGTGGGCTGGTCCACCAACGCCCTGAGGCTCCCCGACGGCACCTACCTCGTGGCCTACCACGGGAT
CCTCCGCCACGACCTTTCCTACCGCCACGGCTTCATGCGCCTAAGCCCGGAAGGGCGGCCTTTGGGGCTTTCCCACTACC
TCCTCGCCCCCCAGGGCCTAGCGGAGTGCTACGGGGACCGCCCCCTCACCCTCTACGGCAACGGCCTCCTCCTCCACGGG
GAGGAGCTCGTCTTCGTGGGGGGCGTGGGGGACTACGCCATCGGGGTCTTCACCGCGCCCCTGGAGGAGGTCCTGAAGCG
GGTGGTGCCCCTCTAA

Upstream 100 bases:

>100_bases
TGGGGCACATCACCCTGAGGCGGGACGGCCTAAAGGCCCTGGAGGAAGGCCTCGCGCGGCTTTCGCGCCTGGTCTCCGAG
CTTCCCTGGGAGGGACGCGT

Downstream 100 bases:

>100_bases
CGCCAAGCCCCCGCCCGAAGGGTATAATCCCACCCAAGCCGAAGGAGGTGGATGTGGACCGGCTTGCGAGGTTCAGAGAA
GTGGTGGCCAAGGCGAAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MTISELEETLKEEARLFLSRARGLRGPHTEDLFARRVYIGPEDVHVENYPRRPLAVFNPGAVLEGEVVHLFPRLVFEYYS
YASAIGHATLPLKDLLAGRIPKPLPVRILLYPTELFEAVRGCEDARAHRREEGYALFYTGVGKLGDARNTDSKEVFTAIL
SLAEFDEAFQLKRKAPIRIGLSGEETGLALYLPTKNATFLEGDHVLLRPSLSGLPDLCWRGRLDPKTLKAYDLRPVLAPE
AFEYKVGWSTNALRLPDGTYLVAYHGILRHDLSYRHGFMRLSPEGRPLGLSHYLLAPQGLAECYGDRPLTLYGNGLLLHG
EELVFVGGVGDYAIGVFTAPLEEVLKRVVPL

Sequences:

>Translated_351_residues
MTISELEETLKEEARLFLSRARGLRGPHTEDLFARRVYIGPEDVHVENYPRRPLAVFNPGAVLEGEVVHLFPRLVFEYYS
YASAIGHATLPLKDLLAGRIPKPLPVRILLYPTELFEAVRGCEDARAHRREEGYALFYTGVGKLGDARNTDSKEVFTAIL
SLAEFDEAFQLKRKAPIRIGLSGEETGLALYLPTKNATFLEGDHVLLRPSLSGLPDLCWRGRLDPKTLKAYDLRPVLAPE
AFEYKVGWSTNALRLPDGTYLVAYHGILRHDLSYRHGFMRLSPEGRPLGLSHYLLAPQGLAECYGDRPLTLYGNGLLLHG
EELVFVGGVGDYAIGVFTAPLEEVLKRVVPL
>Mature_350_residues
TISELEETLKEEARLFLSRARGLRGPHTEDLFARRVYIGPEDVHVENYPRRPLAVFNPGAVLEGEVVHLFPRLVFEYYSY
ASAIGHATLPLKDLLAGRIPKPLPVRILLYPTELFEAVRGCEDARAHRREEGYALFYTGVGKLGDARNTDSKEVFTAILS
LAEFDEAFQLKRKAPIRIGLSGEETGLALYLPTKNATFLEGDHVLLRPSLSGLPDLCWRGRLDPKTLKAYDLRPVLAPEA
FEYKVGWSTNALRLPDGTYLVAYHGILRHDLSYRHGFMRLSPEGRPLGLSHYLLAPQGLAECYGDRPLTLYGNGLLLHGE
ELVFVGGVGDYAIGVFTAPLEEVLKRVVPL

Specific function: Unknown

COG id: COG2152

COG function: function code G; Predicted glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39208; Mature: 39076

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTISELEETLKEEARLFLSRARGLRGPHTEDLFARRVYIGPEDVHVENYPRRPLAVFNPG
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEEEEECCCCCCCCCCCCCCEEEECCC
AVLEGEVVHLFPRLVFEYYSYASAIGHATLPLKDLLAGRIPKPLPVRILLYPTELFEAVR
CEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCEEEEEECHHHHHHHH
GCEDARAHRREEGYALFYTGVGKLGDARNTDSKEVFTAILSLAEFDEAFQLKRKAPIRIG
CCHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
LSGEETGLALYLPTKNATFLEGDHVLLRPSLSGLPDLCWRGRLDPKTLKAYDLRPVLAPE
CCCCCCCEEEEEECCCCEEEECCEEEECCCCCCCCHHHHCCCCCHHHHHHCCCCCCCCCC
AFEYKVGWSTNALRLPDGTYLVAYHGILRHDLSYRHGFMRLSPEGRPLGLSHYLLAPQGL
CEEEEECCCCCEEECCCCCEEEEEHHHHHHHHHHHCCEEEECCCCCCCCCCEEEECCCHH
AECYGDRPLTLYGNGLLLHGEELVFVGGVGDYAIGVFTAPLEEVLKRVVPL
HHHHCCCCEEEECCEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TISELEETLKEEARLFLSRARGLRGPHTEDLFARRVYIGPEDVHVENYPRRPLAVFNPG
CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEEEEECCCCCCCCCCCCCCEEEECCC
AVLEGEVVHLFPRLVFEYYSYASAIGHATLPLKDLLAGRIPKPLPVRILLYPTELFEAVR
CEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCEEEEEECHHHHHHHH
GCEDARAHRREEGYALFYTGVGKLGDARNTDSKEVFTAILSLAEFDEAFQLKRKAPIRIG
CCHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
LSGEETGLALYLPTKNATFLEGDHVLLRPSLSGLPDLCWRGRLDPKTLKAYDLRPVLAPE
CCCCCCCEEEEEECCCCEEEECCEEEECCCCCCCCHHHHCCCCCHHHHHHCCCCCCCCCC
AFEYKVGWSTNALRLPDGTYLVAYHGILRHDLSYRHGFMRLSPEGRPLGLSHYLLAPQGL
CEEEEECCCCCEEECCCCCEEEEEHHHHHHHHHHHCCEEEECCCCCCCCCCEEEECCCHH
AECYGDRPLTLYGNGLLLHGEELVFVGGVGDYAIGVFTAPLEEVLKRVVPL
HHHHCCCCEEEECCEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA