| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is yfaO [C]
Identifier: 55980429
GI number: 55980429
Start: 431075
End: 431485
Strand: Direct
Name: yfaO [C]
Synonym: TTHA0460
Alternate gene names: 55980429
Gene position: 431075-431485 (Clockwise)
Preceding gene: 55980428
Following gene: 55980430
Centisome position: 23.3
GC content: 67.4
Gene sequence:
>411_bases ATGGAGGATCGCCCGCAGTATCCCATCCCCACGGTAGGGGCCTTGGCGGAGAAGGAAGGCCTTGTGCTCTTGGTGCGCAC GGCCAAGTGGCGGGGGCTTTGGGGGGTGCCCGGGGGGAAGGTGGCCTGGGGGGAGGCCCTGGAGGAGGCCTTGCGGCGGG AGTTCCGGGAGGAGGTGGGCCTCGCCCTTTCCCAGGTCCGCTTCGCCCTGGTCCAGGAGGCCATCTTCAGCCCCGAGTTT TACAAGCCCACCCACATGCTCCTCTTCAACTACTTCGCCCGGGCGGAGGGGGAGGTGCGCCCGAACGAGGAGATCCTGGA GTGGGCCTGGGTGGAGCCCGAGAAGGGGCTCGCCTACCCTTTGAACGCCTTTACCCGGGCCCTCTTGGTGCGCTATCTGG AGGGGAGATGA
Upstream 100 bases:
>100_bases CGCAGCTTTTCTTCCTGGGGGTTTTCCTCCTCTTCCACGAGCCTGGCGCCTACCTCACCTTTGTCCTCCTTCAGGCCGTG TATCTTGGCCTTTGGTACCT
Downstream 100 bases:
>100_bases GGACCGCGTTGGTGACGGGGAGCGCCAAGGGCATCGGCCGGGCCATCCTCTTGGCCCTCGCCCGGGAGGGCTACGCCGTG GCCGTCCACTACCGCACCTC
Product: MutT/nudix family protein
Products: NA
Alternate protein names: DGTP Pyrophosphohydrolase/Dihydroneopterin Aldolase; MutT/Nudix Family Protein; Nudix Hydrolase
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MEDRPQYPIPTVGALAEKEGLVLLVRTAKWRGLWGVPGGKVAWGEALEEALRREFREEVGLALSQVRFALVQEAIFSPEF YKPTHMLLFNYFARAEGEVRPNEEILEWAWVEPEKGLAYPLNAFTRALLVRYLEGR
Sequences:
>Translated_136_residues MEDRPQYPIPTVGALAEKEGLVLLVRTAKWRGLWGVPGGKVAWGEALEEALRREFREEVGLALSQVRFALVQEAIFSPEF YKPTHMLLFNYFARAEGEVRPNEEILEWAWVEPEKGLAYPLNAFTRALLVRYLEGR >Mature_136_residues MEDRPQYPIPTVGALAEKEGLVLLVRTAKWRGLWGVPGGKVAWGEALEEALRREFREEVGLALSQVRFALVQEAIFSPEF YKPTHMLLFNYFARAEGEVRPNEEILEWAWVEPEKGLAYPLNAFTRALLVRYLEGR
Specific function: Unknown
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788585, Length=133, Percent_Identity=36.0902255639098, Blast_Score=69, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.6.-.- [C]
Molecular weight: Translated: 15618; Mature: 15618
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDRPQYPIPTVGALAEKEGLVLLVRTAKWRGLWGVPGGKVAWGEALEEALRREFREEVG CCCCCCCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LALSQVRFALVQEAIFSPEFYKPTHMLLFNYFARAEGEVRPNEEILEWAWVEPEKGLAYP HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCC LNAFTRALLVRYLEGR HHHHHHHHHHHHHCCC >Mature Secondary Structure MEDRPQYPIPTVGALAEKEGLVLLVRTAKWRGLWGVPGGKVAWGEALEEALRREFREEVG CCCCCCCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LALSQVRFALVQEAIFSPEFYKPTHMLLFNYFARAEGEVRPNEEILEWAWVEPEKGLAYP HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCC LNAFTRALLVRYLEGR HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA