| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
Click here to switch to the map view.
The map label for this gene is 55980343
Identifier: 55980343
GI number: 55980343
Start: 357077
End: 357727
Strand: Direct
Name: 55980343
Synonym: TTHA0374
Alternate gene names: NA
Gene position: 357077-357727 (Clockwise)
Preceding gene: 55980342
Following gene: 55980345
Centisome position: 19.3
GC content: 68.97
Gene sequence:
>651_bases ATGGGCTTACACGTCCTCGGCGTGAACGCATCGGCTAGGACGGACGGGTTTACGGCGGAGCTTTTGGACGAGGTTTTGGA GGCGGCCAGGCGCAAGGGGGCGACCACCGAGCGCCTGGATTTGGTGCGGCACCCCTTTCCCCTCTGCGCCGGCAACTACT CCGTGGACCCCGCTTCCTGCGGGCCGGAAACCTGCGTCCAGGGGCCCTGGGACGGGTTCGGGAAGGTGGCGGAGCGGATC CTTTCCGCCGACGCGGTGGTCTTCGCCACCCCCGTCTACTGGTTCAGCGTCTCCTCCCGGATGAAGGCCCTCCTGGAGCG GATGACCTCCATGGAGAACCAGGGCCTCCTCAACCTGGGCAAGCCCATGGCCCTCCTGGCGGTGGCGGAGGAGGAAGGGG CGAGCCAGGCCCTCGCCCAGATGCTCCTGCCCCTCTCCTACATGGGCTTCGTCCTCGCCCCCTTGGGCCTGGTCTACGCC CACCGGAAACACCTCACCGCCCTCAAGGAGAGCCCCGAGGTCCTGGAGGACGCCCGCATCGCCGGGGAGAACCTGGTGCT CATGGCGGAGAGGCTCCGGGGGACCTCCTTCCAGGAGCCCTTGCCGAGCTACCTCTACCGGGCGCCCGCCTCGAGGGCCG CGGGGGACTGA
Upstream 100 bases:
>100_bases AAGGCCTTGGTGGAGGCCCGGTGGGCGGAGTACGGCCTGGGCTGGACAACGGTGGGTGAGTGATGTAAACTAAAAGAGGT TTAGTGCGAAGGTGATATTT
Downstream 100 bases:
>100_bases TGCCACCCCATGCTGGCTTGCGCCAGCATGGGGGCCCCGGCAAAAGGTCCCTAGGGAGCTTCCCTGGGCCAGTTGGGCGA AGGAAACCGGAAGAAAGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Redox-Active Protein; Multimeric Flavodoxin WrbA
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MGLHVLGVNASARTDGFTAELLDEVLEAARRKGATTERLDLVRHPFPLCAGNYSVDPASCGPETCVQGPWDGFGKVAERI LSADAVVFATPVYWFSVSSRMKALLERMTSMENQGLLNLGKPMALLAVAEEEGASQALAQMLLPLSYMGFVLAPLGLVYA HRKHLTALKESPEVLEDARIAGENLVLMAERLRGTSFQEPLPSYLYRAPASRAAGD
Sequences:
>Translated_216_residues MGLHVLGVNASARTDGFTAELLDEVLEAARRKGATTERLDLVRHPFPLCAGNYSVDPASCGPETCVQGPWDGFGKVAERI LSADAVVFATPVYWFSVSSRMKALLERMTSMENQGLLNLGKPMALLAVAEEEGASQALAQMLLPLSYMGFVLAPLGLVYA HRKHLTALKESPEVLEDARIAGENLVLMAERLRGTSFQEPLPSYLYRAPASRAAGD >Mature_215_residues GLHVLGVNASARTDGFTAELLDEVLEAARRKGATTERLDLVRHPFPLCAGNYSVDPASCGPETCVQGPWDGFGKVAERIL SADAVVFATPVYWFSVSSRMKALLERMTSMENQGLLNLGKPMALLAVAEEEGASQALAQMLLPLSYMGFVLAPLGLVYAH RKHLTALKESPEVLEDARIAGENLVLMAERLRGTSFQEPLPSYLYRAPASRAAGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23333; Mature: 23202
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLHVLGVNASARTDGFTAELLDEVLEAARRKGATTERLDLVRHPFPLCAGNYSVDPASC CCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCC GPETCVQGPWDGFGKVAERILSADAVVFATPVYWFSVSSRMKALLERMTSMENQGLLNLG CCHHHCCCCCCHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHCC KPMALLAVAEEEGASQALAQMLLPLSYMGFVLAPLGLVYAHRKHLTALKESPEVLEDARI CCHHEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH AGENLVLMAERLRGTSFQEPLPSYLYRAPASRAAGD CCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCC >Mature Secondary Structure GLHVLGVNASARTDGFTAELLDEVLEAARRKGATTERLDLVRHPFPLCAGNYSVDPASC CEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCC GPETCVQGPWDGFGKVAERILSADAVVFATPVYWFSVSSRMKALLERMTSMENQGLLNLG CCHHHCCCCCCHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHCC KPMALLAVAEEEGASQALAQMLLPLSYMGFVLAPLGLVYAHRKHLTALKESPEVLEDARI CCHHEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH AGENLVLMAERLRGTSFQEPLPSYLYRAPASRAAGD CCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA