| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980345
Identifier: 55980345
GI number: 55980345
Start: 358385
End: 358726
Strand: Direct
Name: 55980345
Synonym: TTHA0376
Alternate gene names: NA
Gene position: 358385-358726 (Clockwise)
Preceding gene: 55980343
Following gene: 55980346
Centisome position: 19.37
GC content: 69.88
Gene sequence:
>342_bases GTGGCCGTGTCCAGGACCAGCGTCCACATCCTCCCCATCCTAGGGCCTCCTGCTATACTCCGGCAGGGAATGAGGACCTA TCCCCTGCACTGGGTCTTGGGCGTGGGGGTGCTCCTCGCCCTCGGCCTCTACGCCCAGAGGCTGGGCTTTCTCCCCGCTT GGGCGGCGTGGGGCCTGTGGGCCGGGTACCTTCTCCTTGCGCTCTGGGGCCTGCTTTGGGGAGGGTGGCGGGCCGCGCCC CTCGCCCTCGGGCTTTTGGCCCCTCTTTTCCCGCCTTTGGCCTTTCTCGGGCCCTTGGGCGCCGCCTTGGCCCTGGGGCG GACCCTTCCGGAGAAGGCCTAG
Upstream 100 bases:
>100_bases CTCCAGGAGGCCGAAGAGGACTTCCTCGTGCCGCCTTTCCACCCGCTTGACCCGGCCCACCCCCGCCTCCCCCCGGAAGA GCCCCAGGGAGAGGTAGGGG
Downstream 100 bases:
>100_bases GCCGCCTTCTACGGCTGGGCCCTGGTGTGGCCCGCCCTCGCCCTCCTTCTGGTGTGGCAGGTCTTTCCCACCCTCTACGC CTTTTACCTCAGCCTGTTTG
Product: sugar ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MAVSRTSVHILPILGPPAILRQGMRTYPLHWVLGVGVLLALGLYAQRLGFLPAWAAWGLWAGYLLLALWGLLWGGWRAAP LALGLLAPLFPPLAFLGPLGAALALGRTLPEKA
Sequences:
>Translated_113_residues MAVSRTSVHILPILGPPAILRQGMRTYPLHWVLGVGVLLALGLYAQRLGFLPAWAAWGLWAGYLLLALWGLLWGGWRAAP LALGLLAPLFPPLAFLGPLGAALALGRTLPEKA >Mature_112_residues AVSRTSVHILPILGPPAILRQGMRTYPLHWVLGVGVLLALGLYAQRLGFLPAWAAWGLWAGYLLLALWGLLWGGWRAAPL ALGLLAPLFPPLAFLGPLGAALALGRTLPEKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12038; Mature: 11907
Theoretical pI: Translated: 11.87; Mature: 11.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVSRTSVHILPILGPPAILRQGMRTYPLHWVLGVGVLLALGLYAQRLGFLPAWAAWGLW CCCCCCCEEEEECCCCHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH AGYLLLALWGLLWGGWRAAPLALGLLAPLFPPLAFLGPLGAALALGRTLPEKA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AVSRTSVHILPILGPPAILRQGMRTYPLHWVLGVGVLLALGLYAQRLGFLPAWAAWGLW CCCCCCEEEEECCCCHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH AGYLLLALWGLLWGGWRAAPLALGLLAPLFPPLAFLGPLGAALALGRTLPEKA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA