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The map label for this gene is yfiH [C]

Identifier: 55980331

GI number: 55980331

Start: 340726

End: 341454

Strand: Direct

Name: yfiH [C]

Synonym: TTHA0362

Alternate gene names: 55980331

Gene position: 340726-341454 (Clockwise)

Preceding gene: 55980330

Following gene: 55980332

Centisome position: 18.42

GC content: 75.03

Gene sequence:

>729_bases
GTGACCCTCCTGCGCACCCCCCTCCCGGTGCCCCACGGCTTCACCACCCGGGAAGGCGGGGTCTCCGAGGGACCCTTCCG
CAGCCTCAACCTCTCCGCCGCCACCGGGGACGACCCCGAGAGGGTGGCCGAGAACCAGCGCCGGGTGCTCGCGGCCTTCG
GCCACCCGCCCGTGGCGGGCCTCCGCCAGGTCCACGGCACCGAGGTCCACCCGGTGGAGGGGCCGGGGCTCTGGGAGGGG
GACGGCCTCCTCACCCGCACCCCCGGCCTCCTCCTCCGGGTGGGGGTGGCCGACTGCTACCCCCTCCTCCTCTACCACCC
GAAGGGGGCCGTGGGGGCCCTGCACGCCGGCTGGCGCGGGGTGGTGGGGGGGATCCTGCCCAAGGCCCTGGAGCGCCTCG
AGGCGGTCTACCGCCTGGACCCCACGGAGGTCCACCTGGCCATCGGCCCCGGGATCGGGGGGGCGTGCTACCAGGTGGGC
GAGGAGGTGGTGGCCCGCTTCGCCGAGGCGGGGCTCTTCACCTTCCGCGAGGACCCCGCCGCCCCGGGGAAGTACCTCTT
GGACCTGGAGCAGGCCCTCCTCCTCCAGGCGCGGCGGGCGGGGCTTAGGGAGGAGCGGATCTACCGGGTGGGGCTTTGCA
CCCACTGCGCCCCCAACCTCTTCTCCCACCGCCGGGACCGGGGAAGGACGGGCAGGATGTGGGGCCTCGTGATGCTTCCC
CCCCGTTAA

Upstream 100 bases:

>100_bases
CGGTGCGGCGGGGGTACGTCTCCGTGACCCCGGTGAGCCTGGACCTCACCGCCCACGGCTTCCTCGAGGCGCTTTCAGGC
CTTCTGGAGGGGGTGGCCCC

Downstream 100 bases:

>100_bases
GGCAGCGTACAGGGGCCCGTGGCACAATGGAGGCATGCTCTTCCCCCGGGAGGTCCTCCCCTCCCTCCTCCACCTGACCC
CGGCGTGGCTCAAGGCCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MTLLRTPLPVPHGFTTREGGVSEGPFRSLNLSAATGDDPERVAENQRRVLAAFGHPPVAGLRQVHGTEVHPVEGPGLWEG
DGLLTRTPGLLLRVGVADCYPLLLYHPKGAVGALHAGWRGVVGGILPKALERLEAVYRLDPTEVHLAIGPGIGGACYQVG
EEVVARFAEAGLFTFREDPAAPGKYLLDLEQALLLQARRAGLREERIYRVGLCTHCAPNLFSHRRDRGRTGRMWGLVMLP
PR

Sequences:

>Translated_242_residues
MTLLRTPLPVPHGFTTREGGVSEGPFRSLNLSAATGDDPERVAENQRRVLAAFGHPPVAGLRQVHGTEVHPVEGPGLWEG
DGLLTRTPGLLLRVGVADCYPLLLYHPKGAVGALHAGWRGVVGGILPKALERLEAVYRLDPTEVHLAIGPGIGGACYQVG
EEVVARFAEAGLFTFREDPAAPGKYLLDLEQALLLQARRAGLREERIYRVGLCTHCAPNLFSHRRDRGRTGRMWGLVMLP
PR
>Mature_241_residues
TLLRTPLPVPHGFTTREGGVSEGPFRSLNLSAATGDDPERVAENQRRVLAAFGHPPVAGLRQVHGTEVHPVEGPGLWEGD
GLLTRTPGLLLRVGVADCYPLLLYHPKGAVGALHAGWRGVVGGILPKALERLEAVYRLDPTEVHLAIGPGIGGACYQVGE
EVVARFAEAGLFTFREDPAAPGKYLLDLEQALLLQARRAGLREERIYRVGLCTHCAPNLFSHRRDRGRTGRMWGLVMLPP
R

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Homo sapiens, GI190194374, Length=244, Percent_Identity=27.8688524590164, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI190194372, Length=244, Percent_Identity=27.8688524590164, Blast_Score=77, Evalue=1e-14,
Organism=Escherichia coli, GI1788945, Length=250, Percent_Identity=36.4, Blast_Score=114, Evalue=6e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 26262; Mature: 26130

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLRTPLPVPHGFTTREGGVSEGPFRSLNLSAATGDDPERVAENQRRVLAAFGHPPVAG
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHEEEEECCCCCHHH
LRQVHGTEVHPVEGPGLWEGDGLLTRTPGLLLRVGVADCYPLLLYHPKGAVGALHAGWRG
HHHHCCCCCCCCCCCCCCCCCCCEEECCCEEEEECHHHHEEEEEECCCCCCHHHHCCHHH
VVGGILPKALERLEAVYRLDPTEVHLAIGPGIGGACYQVGEEVVARFAEAGLFTFREDPA
HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEECCCCC
APGKYLLDLEQALLLQARRAGLREERIYRVGLCTHCAPNLFSHRRDRGRTGRMWGLVMLP
CCCHHHHHHHHHHHHHHHHCCCCHHHEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
PR
CC
>Mature Secondary Structure 
TLLRTPLPVPHGFTTREGGVSEGPFRSLNLSAATGDDPERVAENQRRVLAAFGHPPVAG
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHEEEEECCCCCHHH
LRQVHGTEVHPVEGPGLWEGDGLLTRTPGLLLRVGVADCYPLLLYHPKGAVGALHAGWRG
HHHHCCCCCCCCCCCCCCCCCCCEEECCCEEEEECHHHHEEEEEECCCCCCHHHHCCHHH
VVGGILPKALERLEAVYRLDPTEVHLAIGPGIGGACYQVGEEVVARFAEAGLFTFREDPA
HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEECCCCC
APGKYLLDLEQALLLQARRAGLREERIYRVGLCTHCAPNLFSHRRDRGRTGRMWGLVMLP
CCCHHHHHHHHHHHHHHHHCCCCHHHEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
PR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]