| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
Click here to switch to the map view.
The map label for this gene is yqeG [H]
Identifier: 55980332
GI number: 55980332
Start: 341489
End: 341974
Strand: Direct
Name: yqeG [H]
Synonym: TTHA0363
Alternate gene names: 55980332
Gene position: 341489-341974 (Clockwise)
Preceding gene: 55980331
Following gene: 55980333
Centisome position: 18.46
GC content: 69.14
Gene sequence:
>486_bases ATGCTCTTCCCCCGGGAGGTCCTCCCCTCCCTCCTCCACCTGACCCCGGCGTGGCTCAAGGCCCGGGGCCTCAAGGGGGT GATCCTGGACCTGGACAACACCCTCCTCCCCTACGGGGAGGGGGACCTGCCGGAGGCCTACCGGGCGTGGCTTTCGGACC TGAAGGGGGCGGTTCCCGTCTACCTCCTCTCCAACGCCCTCCCCGAGCGCTTTGCCCGGGTGCAGCGCCTCCTGGACCTC CCCGGCCACGCCCCCGCCCTCAAACCCTGGTTCGGCTTCCGCAAGGCGCTCAAAGCCCTGGGCCTGCCCGCCCGGGAGGT GGCGGCGGTGGGGGACCAGGTCTTCACCGATGTCCTCGGGGGCAACCTGGTGGGGGCCTACACCGTCCTGGTCCCCCCCT TGCGGGAGCAGGAGTTCTTTTACACCCGTTTCATACGCATGCTGGAAGCTCCCTTTAGGAGGCCTCGAGGGGGTGTGACG AGATGA
Upstream 100 bases:
>100_bases TCCCACCGCCGGGACCGGGGAAGGACGGGCAGGATGTGGGGCCTCGTGATGCTTCCCCCCCGTTAAGGCAGCGTACAGGG GCCCGTGGCACAATGGAGGC
Downstream 100 bases:
>100_bases GCGTGCTGACCATAGGGGACAAAAGGCTCGGGGCGGCCCTCTTGGACGCCGGGCTCCTCACGGACGAGGAGCTGCAGCGG GCCTTGGAACGGCACCGGGA
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MLFPREVLPSLLHLTPAWLKARGLKGVILDLDNTLLPYGEGDLPEAYRAWLSDLKGAVPVYLLSNALPERFARVQRLLDL PGHAPALKPWFGFRKALKALGLPAREVAAVGDQVFTDVLGGNLVGAYTVLVPPLREQEFFYTRFIRMLEAPFRRPRGGVT R
Sequences:
>Translated_161_residues MLFPREVLPSLLHLTPAWLKARGLKGVILDLDNTLLPYGEGDLPEAYRAWLSDLKGAVPVYLLSNALPERFARVQRLLDL PGHAPALKPWFGFRKALKALGLPAREVAAVGDQVFTDVLGGNLVGAYTVLVPPLREQEFFYTRFIRMLEAPFRRPRGGVT R >Mature_161_residues MLFPREVLPSLLHLTPAWLKARGLKGVILDLDNTLLPYGEGDLPEAYRAWLSDLKGAVPVYLLSNALPERFARVQRLLDL PGHAPALKPWFGFRKALKALGLPAREVAAVGDQVFTDVLGGNLVGAYTVLVPPLREQEFFYTRFIRMLEAPFRRPRGGVT R
Specific function: Unknown
COG id: COG2179
COG function: function code R; Predicted hydrolase of the HAD superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006549 - InterPro: IPR010021 [H]
Pfam domain/function: PF09419 DUF2010 [H]
EC number: NA
Molecular weight: Translated: 17988; Mature: 17988
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFPREVLPSLLHLTPAWLKARGLKGVILDLDNTLLPYGEGDLPEAYRAWLSDLKGAVPV CCCCHHHHHHHHHHCHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHH YLLSNALPERFARVQRLLDLPGHAPALKPWFGFRKALKALGLPAREVAAVGDQVFTDVLG HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC GNLVGAYTVLVPPLREQEFFYTRFIRMLEAPFRRPRGGVTR CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLFPREVLPSLLHLTPAWLKARGLKGVILDLDNTLLPYGEGDLPEAYRAWLSDLKGAVPV CCCCHHHHHHHHHHCHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHH YLLSNALPERFARVQRLLDLPGHAPALKPWFGFRKALKALGLPAREVAAVGDQVFTDVLG HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC GNLVGAYTVLVPPLREQEFFYTRFIRMLEAPFRRPRGGVTR CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]