| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980255
Identifier: 55980255
GI number: 55980255
Start: 275602
End: 277671
Strand: Direct
Name: 55980255
Synonym: TTHA0286
Alternate gene names: NA
Gene position: 275602-277671 (Clockwise)
Preceding gene: 55980254
Following gene: 55980259
Centisome position: 14.9
GC content: 67.0
Gene sequence:
>2070_bases ATGAAGAAGCCTTTGATCCTCTCCGCCCTTGCGCTGGCCGCTCTGCTCTCGGCCTGCTCCCAGGCTCCGAGGCCGACGAA CGCCTCCCCGACGCCCGGCCTTGTGACCACCTCCGAGGGTGTGCGCCACTACCAGGGGCAGGTGGTGGTGGGCTACGAGG ACGAGTCCGGCCTTCAGGAGGCCATCCGTAAGCTGGGGGCCAAGGAGATCGCCCGTATCCCCGAGCTGAAGGCCGCCCTC CTCGAGGTGCCCGGGGATGCCGTCAAGGCGAGCCGGACCCTGAAGGGCCTCCCTGGCCTCCGCTACGCCGAGCCCCACCT GGCCCAGGTAACCCCCCCCAAGGACGACCCCGTGGAGCTCCCCAGGGGCCGGGAAAGCGGCCTCATTCCCTTGGGCAACC CCAGCGACCAAATCCTGGACGAGCTGCCCCAGTACGCTCTGGACCCACGCCACCTCGCCGCCAAGGCGGCCTGGGACAGG GGGTTTGAAGGCGAGGGGGTGGTGGTGGCCATCATTGACGACCCCGCGGACGTAACCCACCCTGACCTCGCCCCCAACTG GGCGGGGAAGGCCTATGACCCGGTCACCGACACCACCTACACCAGCGCCAGCGGCTGGCTGAACTTTATCCAGGGCCTCA ACGCCCCCGCCGACCTCTACCACGGCACCTACGTGGCCTCCACGGTGAGTGCCCCCAGGGACGGCCAGGGCATCGCGGGG CTCGCCCCCAAGACCAAGTTCCTCCCCGTGGCCATCTTCCAGCCCGACTACGTGGGGGACTTCTACGTGGCCCGGGGCAT CGTCTGGGCCGTGAACAACGGAGCCCAAGTGCTCAACAACTCCTGGGGCGGCCTCGGCTACGGCCAACTGGTCAAGGAGG CCTTTGACTACGCCTTGGCCAACGGCGTGGTGGTGGTGGCGAGCGCCGGAAACTCCTACAAAGACGAGGTGCGCACCCCC GCGGGCTATCCCGGGATCATCGCCTCGGCCGCCGCCGACGGCAACCGCAACAAGACGGACTTCTCCACCTACGGGCGGCA CATCTCCAGCGCCGCCCCCGGCTTGGACGTCCTCCTGGCCAACCCCACCTGGCTCGGGGGCGGCTACGGCCTCATCTCCG GAACGTCCTTCTCCGGCCCCTACACCGCCGCGGCGGCCGCCCTGGTGAAGGCCGCCTGCCCTGGCGCCACCCCTTATCAG GTGCGCCGTGCCTTGGAAACCACCACCTGGGAAAAGACCTTCACCCGGGAAAAGGGATGGGGCCACCTGCACGCGGGCCA GCTTGCCGAGCTCCTCTCCCAAGGCTGTGCCGCCTTGCCCGCGAAAGGCGCCGTGGTCCGGGTGAAGGTGGAGTACTTCA ACGAGCGGGGCACCTTCCCTGGCCTTCTCGCCGACGTGATCCTGCGGGGGAAGGGCCTAAAGCCGGGGGATCCCACCGAC CCTACCCCCGTTTACTGGGCCCGTACGGACCAAAACGGCGAGGCCTGGTTCTACGAGATCGCCCCGGGCGAGTACGATAT CTACGTGGCCGGGGCGGACCTGGCCCTCACGGGCGGACCTCCCGAGGAGCGGGGCACCTTCGTGGGCACCCTGGTGGCCA CCCCGGGCTCTAGCGCCTTCAGCCCCGACTCCAAGCTCGTCCGCCTCAACGCAAGCGAGGTCAACCTAAACCCCACCGAT CCTTACGAACCCAACGACACCCTCTCTCAGGCCAAGCCCATCGCCTACGGCCAGACCACCCAGCTCGCCTATATCTTCGG CCAACCCCAGGACTACGACTACTTCCAGTTCACGGGAAGCGCTGGGGACACGATCAAGGCCCGCGTCTACGCTCGCTCCA GCATCGGAGGGACCCTGGACTCCTACCTCTACCTCCTGGACGAAAACGGGCAGGTCCTGGCCGAAAACGACGACATCATT TTCGGCCAAATCACCGACTCGGAGATCATCTTCACCCTGCCCCAGGACGGCACCTATTACCTTGTAGTGACCAGCTACAC CATCGCCAACGGCGGTAGCGACGACAGCCCCTTCAACAAGTACCGCCTCGAGCTCCAGAAGACCAACTAA
Upstream 100 bases:
>100_bases CTACAGCATCCAGACCTGGCCCAGCTCCACCTCCTTCATCCGCATCAGCCGCACGGGGACCCAGGTCTTTGATTTCACCA CCGGTGAGTAAGGAGGCAGC
Downstream 100 bases:
>100_bases GGTCCGTAAGCACCCACCCCCCGGGCTTCCCCGGGGGGTGGTCAAGTTTCGCCTACAGGTGAATCGGCCGCTCCCACGCC GCCAGCGCCGCCTCCTTGAG
Product: serine protease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 689; Mature: 689
Protein sequence:
>689_residues MKKPLILSALALAALLSACSQAPRPTNASPTPGLVTTSEGVRHYQGQVVVGYEDESGLQEAIRKLGAKEIARIPELKAAL LEVPGDAVKASRTLKGLPGLRYAEPHLAQVTPPKDDPVELPRGRESGLIPLGNPSDQILDELPQYALDPRHLAAKAAWDR GFEGEGVVVAIIDDPADVTHPDLAPNWAGKAYDPVTDTTYTSASGWLNFIQGLNAPADLYHGTYVASTVSAPRDGQGIAG LAPKTKFLPVAIFQPDYVGDFYVARGIVWAVNNGAQVLNNSWGGLGYGQLVKEAFDYALANGVVVVASAGNSYKDEVRTP AGYPGIIASAAADGNRNKTDFSTYGRHISSAAPGLDVLLANPTWLGGGYGLISGTSFSGPYTAAAAALVKAACPGATPYQ VRRALETTTWEKTFTREKGWGHLHAGQLAELLSQGCAALPAKGAVVRVKVEYFNERGTFPGLLADVILRGKGLKPGDPTD PTPVYWARTDQNGEAWFYEIAPGEYDIYVAGADLALTGGPPEERGTFVGTLVATPGSSAFSPDSKLVRLNASEVNLNPTD PYEPNDTLSQAKPIAYGQTTQLAYIFGQPQDYDYFQFTGSAGDTIKARVYARSSIGGTLDSYLYLLDENGQVLAENDDII FGQITDSEIIFTLPQDGTYYLVVTSYTIANGGSDDSPFNKYRLELQKTN
Sequences:
>Translated_689_residues MKKPLILSALALAALLSACSQAPRPTNASPTPGLVTTSEGVRHYQGQVVVGYEDESGLQEAIRKLGAKEIARIPELKAAL LEVPGDAVKASRTLKGLPGLRYAEPHLAQVTPPKDDPVELPRGRESGLIPLGNPSDQILDELPQYALDPRHLAAKAAWDR GFEGEGVVVAIIDDPADVTHPDLAPNWAGKAYDPVTDTTYTSASGWLNFIQGLNAPADLYHGTYVASTVSAPRDGQGIAG LAPKTKFLPVAIFQPDYVGDFYVARGIVWAVNNGAQVLNNSWGGLGYGQLVKEAFDYALANGVVVVASAGNSYKDEVRTP AGYPGIIASAAADGNRNKTDFSTYGRHISSAAPGLDVLLANPTWLGGGYGLISGTSFSGPYTAAAAALVKAACPGATPYQ VRRALETTTWEKTFTREKGWGHLHAGQLAELLSQGCAALPAKGAVVRVKVEYFNERGTFPGLLADVILRGKGLKPGDPTD PTPVYWARTDQNGEAWFYEIAPGEYDIYVAGADLALTGGPPEERGTFVGTLVATPGSSAFSPDSKLVRLNASEVNLNPTD PYEPNDTLSQAKPIAYGQTTQLAYIFGQPQDYDYFQFTGSAGDTIKARVYARSSIGGTLDSYLYLLDENGQVLAENDDII FGQITDSEIIFTLPQDGTYYLVVTSYTIANGGSDDSPFNKYRLELQKTN >Mature_689_residues MKKPLILSALALAALLSACSQAPRPTNASPTPGLVTTSEGVRHYQGQVVVGYEDESGLQEAIRKLGAKEIARIPELKAAL LEVPGDAVKASRTLKGLPGLRYAEPHLAQVTPPKDDPVELPRGRESGLIPLGNPSDQILDELPQYALDPRHLAAKAAWDR GFEGEGVVVAIIDDPADVTHPDLAPNWAGKAYDPVTDTTYTSASGWLNFIQGLNAPADLYHGTYVASTVSAPRDGQGIAG LAPKTKFLPVAIFQPDYVGDFYVARGIVWAVNNGAQVLNNSWGGLGYGQLVKEAFDYALANGVVVVASAGNSYKDEVRTP AGYPGIIASAAADGNRNKTDFSTYGRHISSAAPGLDVLLANPTWLGGGYGLISGTSFSGPYTAAAAALVKAACPGATPYQ VRRALETTTWEKTFTREKGWGHLHAGQLAELLSQGCAALPAKGAVVRVKVEYFNERGTFPGLLADVILRGKGLKPGDPTD PTPVYWARTDQNGEAWFYEIAPGEYDIYVAGADLALTGGPPEERGTFVGTLVATPGSSAFSPDSKLVRLNASEVNLNPTD PYEPNDTLSQAKPIAYGQTTQLAYIFGQPQDYDYFQFTGSAGDTIKARVYARSSIGGTLDSYLYLLDENGQVLAENDDII FGQITDSEIIFTLPQDGTYYLVVTSYTIANGGSDDSPFNKYRLELQKTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013783 - InterPro: IPR007280 - InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR017306 [H]
Pfam domain/function: PF00082 Peptidase_S8; PF04151 PPC [H]
EC number: NA
Molecular weight: Translated: 73347; Mature: 73347
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.1 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.1 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKPLILSALALAALLSACSQAPRPTNASPTPGLVTTSEGVRHYQGQVVVGYEDESGLQE CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCHHHHCCEEEEEECCCHHHHH AIRKLGAKEIARIPELKAALLEVPGDAVKASRTLKGLPGLRYAEPHLAQVTPPKDDPVEL HHHHHCHHHHHHCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCC PRGRESGLIPLGNPSDQILDELPQYALDPRHLAAKAAWDRGFEGEGVVVAIIDDPADVTH CCCCCCCEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCC PDLAPNWAGKAYDPVTDTTYTSASGWLNFIQGLNAPADLYHGTYVASTVSAPRDGQGIAG CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHCCEEEEEECCCCCCCCCCCC LAPKTKFLPVAIFQPDYVGDFYVARGIVWAVNNGAQVLNNSWGGLGYGQLVKEAFDYALA CCCCCCEEEEEEECCCCCCCHHHHCCEEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHH NGVVVVASAGNSYKDEVRTPAGYPGIIASAAADGNRNKTDFSTYGRHISSAAPGLDVLLA CCEEEEEECCCCCHHHHCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEE NPTWLGGGYGLISGTSFSGPYTAAAAALVKAACPGATPYQVRRALETTTWEKTFTREKGW CCCEECCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC GHLHAGQLAELLSQGCAALPAKGAVVRVKVEYFNERGTFPGLLADVILRGKGLKPGDPTD CCCCHHHHHHHHHCCHHCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCC PTPVYWARTDQNGEAWFYEIAPGEYDIYVAGADLALTGGPPEERGTFVGTLVATPGSSAF CCCEEEEEECCCCCEEEEEECCCCEEEEEECCCEEECCCCCHHCCCEEEEEEECCCCCCC SPDSKLVRLNASEVNLNPTDPYEPNDTLSQAKPIAYGQTTQLAYIFGQPQDYDYFQFTGS CCCCCEEEEECCEEECCCCCCCCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCEEEEECC AGDTIKARVYARSSIGGTLDSYLYLLDENGQVLAENDDIIFGQITDSEIIFTLPQDGTYY CCCEEEEEEEEECCCCCCCEEEEEEECCCCCEEECCCCEEEEEECCCEEEEECCCCCEEE LVVTSYTIANGGSDDSPFNKYRLELQKTN EEEEEEEEECCCCCCCCCCEEEEEEEECC >Mature Secondary Structure MKKPLILSALALAALLSACSQAPRPTNASPTPGLVTTSEGVRHYQGQVVVGYEDESGLQE CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCHHHHCCEEEEEECCCHHHHH AIRKLGAKEIARIPELKAALLEVPGDAVKASRTLKGLPGLRYAEPHLAQVTPPKDDPVEL HHHHHCHHHHHHCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCC PRGRESGLIPLGNPSDQILDELPQYALDPRHLAAKAAWDRGFEGEGVVVAIIDDPADVTH CCCCCCCEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCC PDLAPNWAGKAYDPVTDTTYTSASGWLNFIQGLNAPADLYHGTYVASTVSAPRDGQGIAG CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHCCEEEEEECCCCCCCCCCCC LAPKTKFLPVAIFQPDYVGDFYVARGIVWAVNNGAQVLNNSWGGLGYGQLVKEAFDYALA CCCCCCEEEEEEECCCCCCCHHHHCCEEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHH NGVVVVASAGNSYKDEVRTPAGYPGIIASAAADGNRNKTDFSTYGRHISSAAPGLDVLLA CCEEEEEECCCCCHHHHCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEE NPTWLGGGYGLISGTSFSGPYTAAAAALVKAACPGATPYQVRRALETTTWEKTFTREKGW CCCEECCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC GHLHAGQLAELLSQGCAALPAKGAVVRVKVEYFNERGTFPGLLADVILRGKGLKPGDPTD CCCCHHHHHHHHHCCHHCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCC PTPVYWARTDQNGEAWFYEIAPGEYDIYVAGADLALTGGPPEERGTFVGTLVATPGSSAF CCCEEEEEECCCCCEEEEEECCCCEEEEEECCCEEECCCCCHHCCCEEEEEEECCCCCCC SPDSKLVRLNASEVNLNPTDPYEPNDTLSQAKPIAYGQTTQLAYIFGQPQDYDYFQFTGS CCCCCEEEEECCEEECCCCCCCCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCEEEEECC AGDTIKARVYARSSIGGTLDSYLYLLDENGQVLAENDDIIFGQITDSEIIFTLPQDGTYY CCCEEEEEEEEECCCCCCCEEEEEEECCCCCEEECCCCEEEEEECCCEEEEECCCCCEEE LVVTSYTIANGGSDDSPFNKYRLELQKTN EEEEEEEEECCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]