Definition Thermus thermophilus HB8 chromosome, complete genome.
Accession NC_006461
Length 1,849,742

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The map label for this gene is 55980207

Identifier: 55980207

GI number: 55980207

Start: 231701

End: 232060

Strand: Reverse

Name: 55980207

Synonym: TTHA0238

Alternate gene names: NA

Gene position: 232060-231701 (Counterclockwise)

Preceding gene: 55980208

Following gene: 55980206

Centisome position: 12.55

GC content: 64.72

Gene sequence:

>360_bases
ATGAGCCGAAAGACGGCCCTTTTCCTCCTGGACCTCCTCGCCCTCCTCCTCTTCGCCGGGGTGGGCCTCCTTTCCCACGG
GCTTCCCCTCTCCTTGGGGGGCCTCGCCCGGAACGTCCTCCCCGTCCTCTTCGTCTGGCTCCTCCTTGCTCCCTTCCTCG
GCACCTACAGGAGGCCCACCTGGAAAAACCTCCTCCTCACCTGGCTCTTCGCCTTCCCCGCGGGGCTATGGCTGAGGCAG
ATGGTCTTGGGCGGGACTTTCGGGGTGGGGTTCTTCGTCTTCTTGGGCGTGGCCATGGGGTTCAGCCTCCTTTTCCTCCT
TCTCCTAAGGGGCCTCGCCAAGGGGCTTCGCCTCTGGTAA

Upstream 100 bases:

>100_bases
AGGCCTGGGGGTACGAGCTGGGCTTTAGGGAGGTCTTCGCCGGGCCCTTGGTGCGGAGCTCCTACCGGGCGGACCGGGTC
TTCCTGGAGGCCACCCAAAG

Downstream 100 bases:

>100_bases
AAAAAAGCCATGGAAAAGGTGGCCTTCATCGGTCTTGGGGCCATGGGCTACCCCATGGCGGGGCACCTGGCGCGGCGTTT
CCCCACCCTGGTCTGGAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MSRKTALFLLDLLALLLFAGVGLLSHGLPLSLGGLARNVLPVLFVWLLLAPFLGTYRRPTWKNLLLTWLFAFPAGLWLRQ
MVLGGTFGVGFFVFLGVAMGFSLLFLLLLRGLAKGLRLW

Sequences:

>Translated_119_residues
MSRKTALFLLDLLALLLFAGVGLLSHGLPLSLGGLARNVLPVLFVWLLLAPFLGTYRRPTWKNLLLTWLFAFPAGLWLRQ
MVLGGTFGVGFFVFLGVAMGFSLLFLLLLRGLAKGLRLW
>Mature_118_residues
SRKTALFLLDLLALLLFAGVGLLSHGLPLSLGGLARNVLPVLFVWLLLAPFLGTYRRPTWKNLLLTWLFAFPAGLWLRQM
VLGGTFGVGFFVFLGVAMGFSLLFLLLLRGLAKGLRLW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13173; Mature: 13042

Theoretical pI: Translated: 12.64; Mature: 12.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRKTALFLLDLLALLLFAGVGLLSHGLPLSLGGLARNVLPVLFVWLLLAPFLGTYRRPT
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
WKNLLLTWLFAFPAGLWLRQMVLGGTFGVGFFVFLGVAMGFSLLFLLLLRGLAKGLRLW
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRKTALFLLDLLALLLFAGVGLLSHGLPLSLGGLARNVLPVLFVWLLLAPFLGTYRRPT
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
WKNLLLTWLFAFPAGLWLRQMVLGGTFGVGFFVFLGVAMGFSLLFLLLLRGLAKGLRLW
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA