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The map label for this gene is 55980205

Identifier: 55980205

GI number: 55980205

Start: 229423

End: 230754

Strand: Reverse

Name: 55980205

Synonym: TTHA0236

Alternate gene names: NA

Gene position: 230754-229423 (Counterclockwise)

Preceding gene: 55980206

Following gene: 55980204

Centisome position: 12.47

GC content: 64.49

Gene sequence:

>1332_bases
GTGGGACCGCCTCCAGGCAGGGAGGTGGGGCCGGGGGAAGAGGTGGAGTTCGCTGGGGATGAACCCCATGTGTACGCCAG
CGAGGAGGGGGCGAGCCTCCTGGTTTTCCTGCACTACCCACTGCCTCCCCGGCCGCAAGGGGAGGCCGGTAGCCCGGAGA
AGGCCTCCTTGGCCCTGCGGGAGGTGAGCCTAGGGGTGGGGGGTCTGGCCTTGGAAGGCCGCTGGCTTGCGCCGGGGTTC
CAGGAAGGGGTTTTTGTTCGTTGGGGCGCAAACCGCACCTACCTCTTTAGCCTCCCTTTGGCCCCCTTACCCCGCCTCGA
GGCCCAGGGGCTTTTGGGCGAGGCCTTGGCCCTCCTCCATGCCCCTAAAGAAGATCTGAGGTCCCATGGGCAAAGCCCCA
GCCTCCTCCTACGCACCCTGGCTTGGGAGGGGTTGCTCCTTAAGGGGGAAGTGGCCGACCCGGCCCCCCTTCTCGTCCAA
ACCGCGCGGTCTCCTGTGGGCTCTTCAAAGGAAGAGGATTGGGAAAGTCGCATCTCGGTGGACCTCTACGCCCGGGTGGA
ACTCCTCCATCCCGGCTACGCCAGGCAGCCCCTTTTTCTGGCCTATGGGTTGCAGGCCGTGGGCCTGGAGAGGGGAAGGT
TTTTGGACGTGGGCACGGGGCCTGGGCATCACCTTCTCCTGCTCTTGGAGCTGTTGCCCCATTTGGAGCCGGTGGCGGTG
GAACCCAGTCCGGCCTCGAGGCAAGCCCTGGCCCAGTTGATCCCAGGCGTGGAGGTGTTGCCTGAGGATTTCACCCTTTT
GGATCCGGAGGAAACCTTTCCCCTGATCGTCTGCGTGGGGGCCAGCCACCACATGTCCACGTGGCGCTTCTTAGAGAAGG
CTTACCGGCTCCTGCGCCCTGGGGGCCTTTTGGCGGTGGCGGACGAGTTTTTGCGTCCCTTCACCACCCGAGAGGAGCGG
GCCCGGAACCTGGTGCTTCACCACACGGCCTACCTGCTCCCCTTTCCCTTGGAGGAAACGGAGGCCCTTTGGGCTTTACG
CCTGCTAGCCTTGCAAGGAGAGTCCCGAGGCCTTAGGGCCTTGGCCGAGGAGGCTCTGCAAGACCTTGAAACGCGTTCCG
ATGCCTTCGCTACCTTTGCGCGGCTGGAGCTCCAGGCCCTTCTGGCCGGGCTGGACTACGAGGTGGAGACCAAGACCTAT
CCCCGCCGTTTTTTGGAGCTGACCTTTGCCGTGGGCTTTGAGCTGGAGCACCACCACCGTTTGTTTGCCACCCATGGCCG
CGGTTCTTGGGACGGGGGCACCCACCTCTTCCTCCTGAGGAGGCCCAAATGA

Upstream 100 bases:

>100_bases
TTGGAGCGCTGGGGCGGGGTGGAGATCCGCTGAGGCCCTTTTCCCCGGCCCTTACCCGGAGCAAGCCAGAAGGGGTGGCT
TCCTAAGGGGGAAGGCCAGG

Downstream 100 bases:

>100_bases
AGCGGGGGCTAGGGGCAGCTTGGCCCGTCGCCTTGGGGTATTTCCCCGTGGCCGTGGCCTTCGGCGCTTTGGGGGCGCAG
GCGGGGCTCAGCCCCCTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; Helix-Turn-Helix Protein

Number of amino acids: Translated: 443; Mature: 442

Protein sequence:

>443_residues
MGPPPGREVGPGEEVEFAGDEPHVYASEEGASLLVFLHYPLPPRPQGEAGSPEKASLALREVSLGVGGLALEGRWLAPGF
QEGVFVRWGANRTYLFSLPLAPLPRLEAQGLLGEALALLHAPKEDLRSHGQSPSLLLRTLAWEGLLLKGEVADPAPLLVQ
TARSPVGSSKEEDWESRISVDLYARVELLHPGYARQPLFLAYGLQAVGLERGRFLDVGTGPGHHLLLLLELLPHLEPVAV
EPSPASRQALAQLIPGVEVLPEDFTLLDPEETFPLIVCVGASHHMSTWRFLEKAYRLLRPGGLLAVADEFLRPFTTREER
ARNLVLHHTAYLLPFPLEETEALWALRLLALQGESRGLRALAEEALQDLETRSDAFATFARLELQALLAGLDYEVETKTY
PRRFLELTFAVGFELEHHHRLFATHGRGSWDGGTHLFLLRRPK

Sequences:

>Translated_443_residues
MGPPPGREVGPGEEVEFAGDEPHVYASEEGASLLVFLHYPLPPRPQGEAGSPEKASLALREVSLGVGGLALEGRWLAPGF
QEGVFVRWGANRTYLFSLPLAPLPRLEAQGLLGEALALLHAPKEDLRSHGQSPSLLLRTLAWEGLLLKGEVADPAPLLVQ
TARSPVGSSKEEDWESRISVDLYARVELLHPGYARQPLFLAYGLQAVGLERGRFLDVGTGPGHHLLLLLELLPHLEPVAV
EPSPASRQALAQLIPGVEVLPEDFTLLDPEETFPLIVCVGASHHMSTWRFLEKAYRLLRPGGLLAVADEFLRPFTTREER
ARNLVLHHTAYLLPFPLEETEALWALRLLALQGESRGLRALAEEALQDLETRSDAFATFARLELQALLAGLDYEVETKTY
PRRFLELTFAVGFELEHHHRLFATHGRGSWDGGTHLFLLRRPK
>Mature_442_residues
GPPPGREVGPGEEVEFAGDEPHVYASEEGASLLVFLHYPLPPRPQGEAGSPEKASLALREVSLGVGGLALEGRWLAPGFQ
EGVFVRWGANRTYLFSLPLAPLPRLEAQGLLGEALALLHAPKEDLRSHGQSPSLLLRTLAWEGLLLKGEVADPAPLLVQT
ARSPVGSSKEEDWESRISVDLYARVELLHPGYARQPLFLAYGLQAVGLERGRFLDVGTGPGHHLLLLLELLPHLEPVAVE
PSPASRQALAQLIPGVEVLPEDFTLLDPEETFPLIVCVGASHHMSTWRFLEKAYRLLRPGGLLAVADEFLRPFTTREERA
RNLVLHHTAYLLPFPLEETEALWALRLLALQGESRGLRALAEEALQDLETRSDAFATFARLELQALLAGLDYEVETKTYP
RRFLELTFAVGFELEHHHRLFATHGRGSWDGGTHLFLLRRPK

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48952; Mature: 48820

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPPPGREVGPGEEVEFAGDEPHVYASEEGASLLVFLHYPLPPRPQGEAGSPEKASLALR
CCCCCCCCCCCCCCEEECCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHH
EVSLGVGGLALEGRWLAPGFQEGVFVRWGANRTYLFSLPLAPLPRLEAQGLLGEALALLH
HHHCCCCCEEECCEEECCCCCCCEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
APKEDLRSHGQSPSLLLRTLAWEGLLLKGEVADPAPLLVQTARSPVGSSKEEDWESRISV
CCHHHHHHCCCCHHHHHHHHHHCCEEEECCCCCCCHHHHHHHCCCCCCCCCHHHHHHCCE
DLYARVELLHPGYARQPLFLAYGLQAVGLERGRFLDVGTGPGHHLLLLLELLPHLEPVAV
EEEEEEEEECCCCCCCCEEEECCCHHCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEE
EPSPASRQALAQLIPGVEVLPEDFTLLDPEETFPLIVCVGASHHMSTWRFLEKAYRLLRP
CCCCHHHHHHHHHCCCCEECCCCCEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCC
GGLLAVADEFLRPFTTREERARNLVLHHTAYLLPFPLEETEALWALRLLALQGESRGLRA
CCHHHHHHHHHCCCCCHHHHHHHEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHH
LAEEALQDLETRSDAFATFARLELQALLAGLDYEVETKTYPRRFLELTFAVGFELEHHHR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHCEEECCCCE
LFATHGRGSWDGGTHLFLLRRPK
EEEECCCCCCCCCCEEEEEECCC
>Mature Secondary Structure 
GPPPGREVGPGEEVEFAGDEPHVYASEEGASLLVFLHYPLPPRPQGEAGSPEKASLALR
CCCCCCCCCCCCCEEECCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHH
EVSLGVGGLALEGRWLAPGFQEGVFVRWGANRTYLFSLPLAPLPRLEAQGLLGEALALLH
HHHCCCCCEEECCEEECCCCCCCEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
APKEDLRSHGQSPSLLLRTLAWEGLLLKGEVADPAPLLVQTARSPVGSSKEEDWESRISV
CCHHHHHHCCCCHHHHHHHHHHCCEEEECCCCCCCHHHHHHHCCCCCCCCCHHHHHHCCE
DLYARVELLHPGYARQPLFLAYGLQAVGLERGRFLDVGTGPGHHLLLLLELLPHLEPVAV
EEEEEEEEECCCCCCCCEEEECCCHHCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEE
EPSPASRQALAQLIPGVEVLPEDFTLLDPEETFPLIVCVGASHHMSTWRFLEKAYRLLRP
CCCCHHHHHHHHHCCCCEECCCCCEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCC
GGLLAVADEFLRPFTTREERARNLVLHHTAYLLPFPLEETEALWALRLLALQGESRGLRA
CCHHHHHHHHHCCCCCHHHHHHHEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHH
LAEEALQDLETRSDAFATFARLELQALLAGLDYEVETKTYPRRFLELTFAVGFELEHHHR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHCEEECCCCE
LFATHGRGSWDGGTHLFLLRRPK
EEEECCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA