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The map label for this gene is ygaZ [C]

Identifier: 55980204

GI number: 55980204

Start: 228776

End: 229426

Strand: Reverse

Name: ygaZ [C]

Synonym: TTHA0235

Alternate gene names: 55980204

Gene position: 229426-228776 (Counterclockwise)

Preceding gene: 55980205

Following gene: 55980203

Centisome position: 12.4

GC content: 69.59

Gene sequence:

>651_bases
ATGAAGCGGGGGCTAGGGGCAGCTTGGCCCGTCGCCTTGGGGTATTTCCCCGTGGCCGTGGCCTTCGGCGCTTTGGGGGC
GCAGGCGGGGCTCAGCCCCCTTTGGGTCCAGCTCACCTCTCTCCTGGTCTTCGCCGGGGCCAGCCAGTTCGCCCTGGTGG
GGCTTTTGGCCCAGGGGGTCCCGCCCTTGTTGGCGGCCCTTTTGGGGCTTCTCCTCAACCTGCGCCACGCCTTCTACGGC
CCCGCCCTGAGGCCCTACCTGAGGGGAGGTCCCCTAGAGGCCTTCTTCCTCACCGATGAGGTCTTCGCCGTGGCTTTGAG
GGCCCTCCCGGGCCTTCCCCCAGGGGAAAGGCGGGGCTACTTCCTGGGCTTGGGCCTCGGGGCCTACCTCTCCTGGAACC
TGGGCACCGCCCTCGGGGTCTTGGGGGCCCAGGGGCTCTTGGCCTTCCCGGGTTTGGGGGAGGCCCTTTCCTTCGCCCTT
CCCGCCCTTTTCTTCCTCCTGGCCCTGCCCCACCTGAAGAACCCCGTGGCCCTGCTGGCGGGCGGGGTGGCCCTGGGCTT
CCACCTCCTGGGCCAGACGGCCTGGGGCCTCTTCCTGGCAGGGGTCACCGGGCTCCTTGGAGAGGGATTTGGCGAAAGGA
GGCGTCCATGA

Upstream 100 bases:

>100_bases
CCGTGGGCTTTGAGCTGGAGCACCACCACCGTTTGTTTGCCACCCATGGCCGCGGTTCTTGGGACGGGGGCACCCACCTC
TTCCTCCTGAGGAGGCCCAA

Downstream 100 bases:

>100_bases
CCTTGGCCCTTCTCCTTCTGGCCCTGGGCACCTTTCTCCTCCGGTTCCGGTCGTGTAAGGATTTATGTGTAAGGGTCCGT
GTTTAATAGGGGGGCACACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MKRGLGAAWPVALGYFPVAVAFGALGAQAGLSPLWVQLTSLLVFAGASQFALVGLLAQGVPPLLAALLGLLLNLRHAFYG
PALRPYLRGGPLEAFFLTDEVFAVALRALPGLPPGERRGYFLGLGLGAYLSWNLGTALGVLGAQGLLAFPGLGEALSFAL
PALFFLLALPHLKNPVALLAGGVALGFHLLGQTAWGLFLAGVTGLLGEGFGERRRP

Sequences:

>Translated_216_residues
MKRGLGAAWPVALGYFPVAVAFGALGAQAGLSPLWVQLTSLLVFAGASQFALVGLLAQGVPPLLAALLGLLLNLRHAFYG
PALRPYLRGGPLEAFFLTDEVFAVALRALPGLPPGERRGYFLGLGLGAYLSWNLGTALGVLGAQGLLAFPGLGEALSFAL
PALFFLLALPHLKNPVALLAGGVALGFHLLGQTAWGLFLAGVTGLLGEGFGERRRP
>Mature_216_residues
MKRGLGAAWPVALGYFPVAVAFGALGAQAGLSPLWVQLTSLLVFAGASQFALVGLLAQGVPPLLAALLGLLLNLRHAFYG
PALRPYLRGGPLEAFFLTDEVFAVALRALPGLPPGERRGYFLGLGLGAYLSWNLGTALGVLGAQGLLAFPGLGEALSFAL
PALFFLLALPHLKNPVALLAGGVALGFHLLGQTAWGLFLAGVTGLLGEGFGERRRP

Specific function: Unknown

COG id: COG1296

COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AzlC family [H]

Homologues:

Organism=Escherichia coli, GI1789038, Length=188, Percent_Identity=36.7021276595745, Blast_Score=104, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011606 [H]

Pfam domain/function: PF03591 AzlC [H]

EC number: NA

Molecular weight: Translated: 22306; Mature: 22306

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRGLGAAWPVALGYFPVAVAFGALGAQAGLSPLWVQLTSLLVFAGASQFALVGLLAQGV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCC
PPLLAALLGLLLNLRHAFYGPALRPYLRGGPLEAFFLTDEVFAVALRALPGLPPGERRGY
HHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCE
FLGLGLGAYLSWNLGTALGVLGAQGLLAFPGLGEALSFALPALFFLLALPHLKNPVALLA
EEEECHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
GGVALGFHLLGQTAWGLFLAGVTGLLGEGFGERRRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKRGLGAAWPVALGYFPVAVAFGALGAQAGLSPLWVQLTSLLVFAGASQFALVGLLAQGV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCC
PPLLAALLGLLLNLRHAFYGPALRPYLRGGPLEAFFLTDEVFAVALRALPGLPPGERRGY
HHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCE
FLGLGLGAYLSWNLGTALGVLGAQGLLAFPGLGEALSFALPALFFLLALPHLKNPVALLA
EEEECHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
GGVALGFHLLGQTAWGLFLAGVTGLLGEGFGERRRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]