| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980184
Identifier: 55980184
GI number: 55980184
Start: 211312
End: 211653
Strand: Reverse
Name: 55980184
Synonym: TTHA0215
Alternate gene names: NA
Gene position: 211653-211312 (Counterclockwise)
Preceding gene: 55980185
Following gene: 55980183
Centisome position: 11.44
GC content: 76.02
Gene sequence:
>342_bases GTGCCGGGACGGGTGGTCCTCACGGAGGCGGCCTTGGCGAGCCTCCTCGCCCTGGTGGCCCACGAGGTCCCGGGGGTGGT GGGCATGGCCCCCGCGGGCCTCAAGGACCAGGTGGGGCGCATCCTCGGGCGGCAGGAGGCGGGGGAGGGGGTGGTGGTCC GCCCCGACCCCCAAAGCCCGGGCCGCTACCAGGTGGACCTCTACGTGGTCCTGGCCTACGGCACCCGGGTGCCCGCCTTG GCGGAGGCCTTGGGGGAGCGGCTCGCCTACGCGGCCCGCCACCTTGGGGGGGTGGAGCTCTCCCAGGTCCGGGTCCACGT GGTGGGGGTGCGGTGTGGCTGA
Upstream 100 bases:
>100_bases AGGGGCTCAACACCCACAAAGGCCGCCTCACCCACCCCGGGGTGGCCGAGGCCTTCGGCCTGCCCTACACGCCTCCCGAG GAGGCCTTGAGGGGGTGAGG
Downstream 100 bases:
>100_bases GGCCTGGGGTCCCGAGGCGGTGGCGGAGGCCTTCCGCTACGCCACCCGCTGGTTTCAGGTCTACGTGGAGGAGCTCAACG CCCTCAACGTCTACCCCGTC
Product: alkaline shock protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MPGRVVLTEAALASLLALVAHEVPGVVGMAPAGLKDQVGRILGRQEAGEGVVVRPDPQSPGRYQVDLYVVLAYGTRVPAL AEALGERLAYAARHLGGVELSQVRVHVVGVRCG
Sequences:
>Translated_113_residues MPGRVVLTEAALASLLALVAHEVPGVVGMAPAGLKDQVGRILGRQEAGEGVVVRPDPQSPGRYQVDLYVVLAYGTRVPAL AEALGERLAYAARHLGGVELSQVRVHVVGVRCG >Mature_112_residues PGRVVLTEAALASLLALVAHEVPGVVGMAPAGLKDQVGRILGRQEAGEGVVVRPDPQSPGRYQVDLYVVLAYGTRVPALA EALGERLAYAARHLGGVELSQVRVHVVGVRCG
Specific function: Unknown
COG id: COG1302
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11773; Mature: 11642
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGRVVLTEAALASLLALVAHEVPGVVGMAPAGLKDQVGRILGRQEAGEGVVVRPDPQSP CCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCC GRYQVDLYVVLAYGTRVPALAEALGERLAYAARHLGGVELSQVRVHVVGVRCG CCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECC >Mature Secondary Structure PGRVVLTEAALASLLALVAHEVPGVVGMAPAGLKDQVGRILGRQEAGEGVVVRPDPQSP CCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCC GRYQVDLYVVLAYGTRVPALAEALGERLAYAARHLGGVELSQVRVHVVGVRCG CCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA