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The map label for this gene is 55980165

Identifier: 55980165

GI number: 55980165

Start: 191670

End: 192749

Strand: Reverse

Name: 55980165

Synonym: TTHA0196

Alternate gene names: NA

Gene position: 192749-191670 (Counterclockwise)

Preceding gene: 55980166

Following gene: 55980160

Centisome position: 10.42

GC content: 67.78

Gene sequence:

>1080_bases
ATGAAGCGGCGCGACTTTTTGAAGCGGGCAGGCATCGGCGTGGCGGCGAGCGCGGCCTTTGGCCCCGTCTTCGCCCAGGG
GAGCCCCACCGTCCGCTGGCGCATGGCCAGTAGCTTCCCCAAGAGCCTGGACACCATCTACGGGGCGGCGGAGGTCCTGG
CCGACCGGGTCTCCGCCCTCACGGGGGGCCGCTTCCAGATCCGGGTCTACCAGGCGGGGGAGATCGTCCCCGGCCTCCAG
GTTATGGACGCGGTGCAGCAGGGCACGGTGGAGGCGGGGCACACGGCGAGCTACTACTACGTGGGCAAGGCCCAGGTCCT
GGCCTTTGACACCAGCGTGCCCTTCGGCCTCACCGCCAGGCAGCAGAACGCCTGGATGTACCACGGGGGCGGGATTGAGC
TTTTCCGCCCCATCTTCGCCGACTTCAACATCATCCAGTTCCCTGGGGGCAACACCGGGGTCCAGATGGGGGGCTGGTTC
CGCAAGGAGGTGAGGAGCCTCGCCGACCTCAAGGGCCTCAAGATGCGCATCCCCGGGCCCGGCGGCCAGGTGATGAGCCG
CCTGGGCGTGGTGCCCCAGGTGCTGGCGGGCGGGGACATCTACCCGGCTTTGGAGCGGGGCACCATTGACGCCACCGAGT
GGGTGGGGCCCTACGACGACGAGAAGCTCGGCTTCTACAAGGTGGCCAAGTACTACTACTATCCCGGTTGGCACGAGCCC
GGGCCCATGCTCTCCTTCTACGTGAACCTTCAGGAGTGGCGGAAGCTCCCCAAGGAGTACCAGCAGGCCTTTGAGGTGGC
CGCCGCCGAGGCCAACCAGTGGATGATGGCCAAGTACGACCGGGTGAACCCGCCCGCCCTCCAGCGCCTCCTCCGGGCCG
GGGTGCGCCTCAGGAAGTGGCCCAACGAGATCATGCAGGCGGCCCAGAAGGCGGCCTTTGAGTGGTTTGAAGAAGAGGCG
GCCAAGGACGCCACCTACCGCAAGGTCTACACCGCCTGGAAGGCCTTCCGGGAGGAGCAGTACCGCTGGTTCGCCGTGGC
CGAGCTGGGCTACGCCCAGTTCGCCTTCCCGGGCGTCTGA

Upstream 100 bases:

>100_bases
CGACGTGGCCGAGACCTACTTTTACGTCCGCTAGGGGCTTGCCCAAACGCGGCGTTTGGGGTATGATCCCGGCGGACACC
CTTAGGGGAGGTGAATAAAG

Downstream 100 bases:

>100_bases
TCCGGGCGAAGGCCGAGGCCCCCAGGGCTTGCCCTGGGGGCCTTTTGCAGTGCTTCGCCGCGGTCCTTAGAAGCGGAAGT
TCCGCACGAACTCCATGATC

Product: ABC transporter substrate-binding protein

Products: NA

Alternate protein names: Twin-Arginine Translocation Pathway Signal; TRAP Dicarboxylate Transporter Subunit DctP; Trap Dicarboxylate Transporter- Dctp Subunit; Transporter Periplasmic Component; TRAP Mannitol/C4-Dicarboxylate Transporter; TRAP-Type Mannitol/Chloroaromatic Compound Transport System; TRAP Dicarboxylate Transporter DctP Subunit; Tat Pathway Signal Sequence Domain-Containing Protein; Periplasmic TRAP-Type Dicarboxylate Transporter Protein; Trap-T Transport System Periplasmic Component; TRAP Dicarboxylate Transporter-DctP Subunit; C4-Dicarboxylate Transporter; TRAP Transporter; Tat Pathway Signal Sequence Domain-Containing; TRAP Dicarboxylate Transporter; TRAP Dicarboxylate Transporter- Dctp Subunit

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MKRRDFLKRAGIGVAASAAFGPVFAQGSPTVRWRMASSFPKSLDTIYGAAEVLADRVSALTGGRFQIRVYQAGEIVPGLQ
VMDAVQQGTVEAGHTASYYYVGKAQVLAFDTSVPFGLTARQQNAWMYHGGGIELFRPIFADFNIIQFPGGNTGVQMGGWF
RKEVRSLADLKGLKMRIPGPGGQVMSRLGVVPQVLAGGDIYPALERGTIDATEWVGPYDDEKLGFYKVAKYYYYPGWHEP
GPMLSFYVNLQEWRKLPKEYQQAFEVAAAEANQWMMAKYDRVNPPALQRLLRAGVRLRKWPNEIMQAAQKAAFEWFEEEA
AKDATYRKVYTAWKAFREEQYRWFAVAELGYAQFAFPGV

Sequences:

>Translated_359_residues
MKRRDFLKRAGIGVAASAAFGPVFAQGSPTVRWRMASSFPKSLDTIYGAAEVLADRVSALTGGRFQIRVYQAGEIVPGLQ
VMDAVQQGTVEAGHTASYYYVGKAQVLAFDTSVPFGLTARQQNAWMYHGGGIELFRPIFADFNIIQFPGGNTGVQMGGWF
RKEVRSLADLKGLKMRIPGPGGQVMSRLGVVPQVLAGGDIYPALERGTIDATEWVGPYDDEKLGFYKVAKYYYYPGWHEP
GPMLSFYVNLQEWRKLPKEYQQAFEVAAAEANQWMMAKYDRVNPPALQRLLRAGVRLRKWPNEIMQAAQKAAFEWFEEEA
AKDATYRKVYTAWKAFREEQYRWFAVAELGYAQFAFPGV
>Mature_359_residues
MKRRDFLKRAGIGVAASAAFGPVFAQGSPTVRWRMASSFPKSLDTIYGAAEVLADRVSALTGGRFQIRVYQAGEIVPGLQ
VMDAVQQGTVEAGHTASYYYVGKAQVLAFDTSVPFGLTARQQNAWMYHGGGIELFRPIFADFNIIQFPGGNTGVQMGGWF
RKEVRSLADLKGLKMRIPGPGGQVMSRLGVVPQVLAGGDIYPALERGTIDATEWVGPYDDEKLGFYKVAKYYYYPGWHEP
GPMLSFYVNLQEWRKLPKEYQQAFEVAAAEANQWMMAKYDRVNPPALQRLLRAGVRLRKWPNEIMQAAQKAAFEWFEEEA
AKDATYRKVYTAWKAFREEQYRWFAVAELGYAQFAFPGV

Specific function: Unknown

COG id: COG4663

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40330; Mature: 40330

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRDFLKRAGIGVAASAAFGPVFAQGSPTVRWRMASSFPKSLDTIYGAAEVLADRVSAL
CCHHHHHHHCCCCEEEHHHCCCEEECCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHH
TGGRFQIRVYQAGEIVPGLQVMDAVQQGTVEAGHTASYYYVGKAQVLAFDTSVPFGLTAR
CCCEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCEEEEEEECCCCCCEEEC
QQNAWMYHGGGIELFRPIFADFNIIQFPGGNTGVQMGGWFRKEVRSLADLKGLKMRIPGP
CCCCEEEECCCHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCC
GGQVMSRLGVVPQVLAGGDIYPALERGTIDATEWVGPYDDEKLGFYKVAKYYYYPGWHEP
CHHHHHHHCCHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEHHHEEECCCCCCC
GPMLSFYVNLQEWRKLPKEYQQAFEVAAAEANQWMMAKYDRVNPPALQRLLRAGVRLRKW
CCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHCCHHHHCC
PNEIMQAAQKAAFEWFEEEAAKDATYRKVYTAWKAFREEQYRWFAVAELGYAQFAFPGV
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHCCCCC
>Mature Secondary Structure
MKRRDFLKRAGIGVAASAAFGPVFAQGSPTVRWRMASSFPKSLDTIYGAAEVLADRVSAL
CCHHHHHHHCCCCEEEHHHCCCEEECCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHH
TGGRFQIRVYQAGEIVPGLQVMDAVQQGTVEAGHTASYYYVGKAQVLAFDTSVPFGLTAR
CCCEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCEEEEEEECCCCCCEEEC
QQNAWMYHGGGIELFRPIFADFNIIQFPGGNTGVQMGGWFRKEVRSLADLKGLKMRIPGP
CCCCEEEECCCHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCC
GGQVMSRLGVVPQVLAGGDIYPALERGTIDATEWVGPYDDEKLGFYKVAKYYYYPGWHEP
CHHHHHHHCCHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEHHHEEECCCCCCC
GPMLSFYVNLQEWRKLPKEYQQAFEVAAAEANQWMMAKYDRVNPPALQRLLRAGVRLRKW
CCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHCCHHHHCC
PNEIMQAAQKAAFEWFEEEAAKDATYRKVYTAWKAFREEQYRWFAVAELGYAQFAFPGV
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA