Click here to switch to the map view.

The map label for this gene is 55980161

Identifier: 55980161

GI number: 55980161

Start: 187399

End: 188238

Strand: Direct

Name: 55980161

Synonym: TTHA0192

Alternate gene names: NA

Gene position: 187399-188238 (Clockwise)

Preceding gene: 55980157

Following gene: 55980162

Centisome position: 10.13

GC content: 73.93

Gene sequence:

>840_bases
ATGAGGCTTCTCGCCGCCCTAGACTTCGGCCTGACCCACGAGAGCGTGGTGGCCACGGCCCGGGCCCTGGCCCCCGCCTT
GGGCCTCGAGGCCCACCTGGTCCACGTGATCCCCGACCCCTACTTCCAGGGCCTGGCCCACCGCTTCCCCGACCTCGCCC
CCCTTCTCCGGGAGGCCCTGGACCGGGTGGAGGCCCGGGTGCGGGAGGCCTTGGGGGCCACGGGGCTTAAGGCCCGGGTC
TTAAGGGGGCTTCCCGCCTTCGCCGTGGGCGGGGAGGCCGCCCGGGCCAAGCTCGTGGTCCTGGGCCAGACGGGGGACGA
CCCCCTGGAGCGCCTGGCCCGGGGAGGGCTTGCCCGCTACCTCCTCCACCGGGGGGAGGCCCCCGTCCTCCTCGTCCCCC
CGGAAAGGCCCCTCACGGCGGTGAGGCGGATCGGCGTGGGGCTGGACGAAAGCGACGCCAGCCTCGCCGCCTTCCGCCTG
GCCCTCAGCTGGAAGGAGGCCCTGGGCGCCGAGGTCCTGGGCCTCCACCTGGTGAGCGGGGAAGGGGGGTGCTGCTACCC
CACCTACCTGGACCCCAAAGGCCTCTCCCTCGCCGAGGTCCTGGAGAAGGCCGAGGCCTTCCTAAGGGCGCGCTACACCC
CCCTGGACCGGCTTCTCGTCACCAAGGGGGAGGACGAGGCCGACCTCGTGGAGCTCGCCCGCCGGGAAAAGCTGGACCTC
CTCGTCCTCGGCTCCAAGGCCAAGCGCACCTGGCGCAGGCGCCTGGGCGGCACGGTGGAGGCGGCCCTGCAGCGGACCGA
CCTCCCCCTCCTCGTGGTCCCCGAGGCCACGGTCTGGTAG

Upstream 100 bases:

>100_bases
CACCCCAAGGAGCCGCACCCGGTCCAGGTCCAGGGCCCGGTCCCGAAGCCAGAGCGTCCGCACAGGAGGGATTATAGTGG
GTCCTAAAGGAGGTGCGCCC

Downstream 100 bases:

>100_bases
GCTTGGGGCCATGCGCCACGGGCCCTCGTGGTTCCTGCGCCTCTCCGCCTACTGGTTCGCCACCAGCTTCAAGTGGTTCC
TGGTCCTCCTCGTCCTCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MRLLAALDFGLTHESVVATARALAPALGLEAHLVHVIPDPYFQGLAHRFPDLAPLLREALDRVEARVREALGATGLKARV
LRGLPAFAVGGEAARAKLVVLGQTGDDPLERLARGGLARYLLHRGEAPVLLVPPERPLTAVRRIGVGLDESDASLAAFRL
ALSWKEALGAEVLGLHLVSGEGGCCYPTYLDPKGLSLAEVLEKAEAFLRARYTPLDRLLVTKGEDEADLVELARREKLDL
LVLGSKAKRTWRRRLGGTVEAALQRTDLPLLVVPEATVW

Sequences:

>Translated_279_residues
MRLLAALDFGLTHESVVATARALAPALGLEAHLVHVIPDPYFQGLAHRFPDLAPLLREALDRVEARVREALGATGLKARV
LRGLPAFAVGGEAARAKLVVLGQTGDDPLERLARGGLARYLLHRGEAPVLLVPPERPLTAVRRIGVGLDESDASLAAFRL
ALSWKEALGAEVLGLHLVSGEGGCCYPTYLDPKGLSLAEVLEKAEAFLRARYTPLDRLLVTKGEDEADLVELARREKLDL
LVLGSKAKRTWRRRLGGTVEAALQRTDLPLLVVPEATVW
>Mature_279_residues
MRLLAALDFGLTHESVVATARALAPALGLEAHLVHVIPDPYFQGLAHRFPDLAPLLREALDRVEARVREALGATGLKARV
LRGLPAFAVGGEAARAKLVVLGQTGDDPLERLARGGLARYLLHRGEAPVLLVPPERPLTAVRRIGVGLDESDASLAAFRL
ALSWKEALGAEVLGLHLVSGEGGCCYPTYLDPKGLSLAEVLEKAEAFLRARYTPLDRLLVTKGEDEADLVELARREKLDL
LVLGSKAKRTWRRRLGGTVEAALQRTDLPLLVVPEATVW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30162; Mature: 30162

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLAALDFGLTHESVVATARALAPALGLEAHLVHVIPDPYFQGLAHRFPDLAPLLREAL
CCCCEEHHCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHH
DRVEARVREALGATGLKARVLRGLPAFAVGGEAARAKLVVLGQTGDDPLERLARGGLARY
HHHHHHHHHHHCCCCHHHHHHHCCCCCEECCCCCEEEEEEEECCCCHHHHHHHHCHHHHH
LLHRGEAPVLLVPPERPLTAVRRIGVGLDESDASLAAFRLALSWKEALGAEVLGLHLVSG
HHHCCCCCEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECC
EGGCCYPTYLDPKGLSLAEVLEKAEAFLRARYTPLDRLLVTKGEDEADLVELARREKLDL
CCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHEEECCCCHHHHHHHHHHCCCCE
LVLGSKAKRTWRRRLGGTVEAALQRTDLPLLVVPEATVW
EEECCHHHHHHHHHHCCHHHHHHHHCCCCEEEECCCCCC
>Mature Secondary Structure
MRLLAALDFGLTHESVVATARALAPALGLEAHLVHVIPDPYFQGLAHRFPDLAPLLREAL
CCCCEEHHCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHH
DRVEARVREALGATGLKARVLRGLPAFAVGGEAARAKLVVLGQTGDDPLERLARGGLARY
HHHHHHHHHHHCCCCHHHHHHHCCCCCEECCCCCEEEEEEEECCCCHHHHHHHHCHHHHH
LLHRGEAPVLLVPPERPLTAVRRIGVGLDESDASLAAFRLALSWKEALGAEVLGLHLVSG
HHHCCCCCEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECC
EGGCCYPTYLDPKGLSLAEVLEKAEAFLRARYTPLDRLLVTKGEDEADLVELARREKLDL
CCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHEEECCCCHHHHHHHHHHCCCCE
LVLGSKAKRTWRRRLGGTVEAALQRTDLPLLVVPEATVW
EEECCHHHHHHHHHHCCHHHHHHHHCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA