Click here to switch to the map view.

The map label for this gene is 55980162

Identifier: 55980162

GI number: 55980162

Start: 188249

End: 189457

Strand: Direct

Name: 55980162

Synonym: TTHA0193

Alternate gene names: NA

Gene position: 188249-189457 (Clockwise)

Preceding gene: 55980161

Following gene: 55980163

Centisome position: 10.18

GC content: 70.89

Gene sequence:

>1209_bases
ATGCGCCACGGGCCCTCGTGGTTCCTGCGCCTCTCCGCCTACTGGTTCGCCACCAGCTTCAAGTGGTTCCTGGTCCTCCT
CGTCCTCCTCCCGGCCAAGGTGGCGGAGGTCTCCCCCCCGGAGGAGAAGGCCTCGAGGCTCGGCTTCCTCTTCGGCCTGG
GGGCGGTGATGGCCATCCTGGGGCCGCCCGTGATGGGCTACCTCTCGGACCGCCTGGGCCGGAGGAGGCCCTTTCTCCTT
TGGGGGAGCCTCCTCACCGCCTTCGCCCTCCTCCTCCTGGTCCACGCGCCGAGCTACACGGCGCTCCTTTTCGCCTACCT
CCTCCTCCAGGTGGCGGACGACCTGGCCACGGGGCCCTATAGCGCCTTGATCCCCGACCTGGTGCCCAAGGGGGAACGGG
GGGCCGCCTCGGGGTACATGGGGGTGCTGCAGGTCTCGGGGCAGGTCCTGGCGGGCGCGGTGGGCTTCCTCCTTCCCCTC
GCCCCCCAGGCCTACCTGGCCGCCCTCCTCAACCTCCTAGGGGCGGCCTTAAGCCTCTCCCTCGTCCCCGACCGCCTCCC
CAAGGCCAACCCGAGGCCCTTCCTCAAGGCCATGGCCGCCCCGTGGCGGGACCGGGACTTCCTCCTCGTCTACCTCACCC
GCTTCCTGGTGATGCTGGGCTTCTACCTGGCCCAGACCTACCTGCAGTACTACCTGGCCGACGTGGTGCGAAGCTTCCAA
GCCCTGGGGCGGACCCTCACGGAAGCGCCCTTCCAGGCGGTGGCCCTCCTGGGCCTCCTCATCTCCTTGGGGGCCGCCCT
CGCCAGCGTCCCCGCGGGGCGGGCCTCGGACCGCCTGGGCCGGAAGCCCCTCATCTACCTCTCGGGGGCGGGGCTTGGCC
TCCTCATGCCCTTCCTCCTCCTCTTCCCCCGCTACGACCTCCTCCTCGCCCTGGCCCTCGTCTTCGGCCTCTTCTACGGG
GTCTACCTGGCGGTGGACTGGGCCTTGGTGGCGGACGTCCTCAAAGACCCCGAGGCCCACGCCACGGACATGGGCCTGTG
GCAGACCGCCATCGTGGTGCCCCAGGTCCTGGCGGGGGCCTTTGGCCGGCCTCTGGACCTTCTGAACGCCCAGACCCCCG
GCCTCGGCTACCAGGTGCTCTACCTCCTCGCCGCCCTCTTCTTCCTGCTCGGGGCCTTCGGGGTGGCCGGGGTGCGGCGG
AGCCGGTGA

Upstream 100 bases:

>100_bases
TGGCGCAGGCGCCTGGGCGGCACGGTGGAGGCGGCCCTGCAGCGGACCGACCTCCCCCTCCTCGTGGTCCCCGAGGCCAC
GGTCTGGTAGGCTTGGGGCC

Downstream 100 bases:

>100_bases
GGCCGGGGGGCGCATAGCCCGAAAACGCCTTAAGAAAGCCGCGTTGACAGGCCTCGCCCCCCTAGGTAGGATGGGGCGGG
TCTACACCGGGAGGTTAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: Facilitator Superfamily Transporter; Facilitator Transporter; Facilitator Superfamily Permease

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MRHGPSWFLRLSAYWFATSFKWFLVLLVLLPAKVAEVSPPEEKASRLGFLFGLGAVMAILGPPVMGYLSDRLGRRRPFLL
WGSLLTAFALLLLVHAPSYTALLFAYLLLQVADDLATGPYSALIPDLVPKGERGAASGYMGVLQVSGQVLAGAVGFLLPL
APQAYLAALLNLLGAALSLSLVPDRLPKANPRPFLKAMAAPWRDRDFLLVYLTRFLVMLGFYLAQTYLQYYLADVVRSFQ
ALGRTLTEAPFQAVALLGLLISLGAALASVPAGRASDRLGRKPLIYLSGAGLGLLMPFLLLFPRYDLLLALALVFGLFYG
VYLAVDWALVADVLKDPEAHATDMGLWQTAIVVPQVLAGAFGRPLDLLNAQTPGLGYQVLYLLAALFFLLGAFGVAGVRR
SR

Sequences:

>Translated_402_residues
MRHGPSWFLRLSAYWFATSFKWFLVLLVLLPAKVAEVSPPEEKASRLGFLFGLGAVMAILGPPVMGYLSDRLGRRRPFLL
WGSLLTAFALLLLVHAPSYTALLFAYLLLQVADDLATGPYSALIPDLVPKGERGAASGYMGVLQVSGQVLAGAVGFLLPL
APQAYLAALLNLLGAALSLSLVPDRLPKANPRPFLKAMAAPWRDRDFLLVYLTRFLVMLGFYLAQTYLQYYLADVVRSFQ
ALGRTLTEAPFQAVALLGLLISLGAALASVPAGRASDRLGRKPLIYLSGAGLGLLMPFLLLFPRYDLLLALALVFGLFYG
VYLAVDWALVADVLKDPEAHATDMGLWQTAIVVPQVLAGAFGRPLDLLNAQTPGLGYQVLYLLAALFFLLGAFGVAGVRR
SR
>Mature_402_residues
MRHGPSWFLRLSAYWFATSFKWFLVLLVLLPAKVAEVSPPEEKASRLGFLFGLGAVMAILGPPVMGYLSDRLGRRRPFLL
WGSLLTAFALLLLVHAPSYTALLFAYLLLQVADDLATGPYSALIPDLVPKGERGAASGYMGVLQVSGQVLAGAVGFLLPL
APQAYLAALLNLLGAALSLSLVPDRLPKANPRPFLKAMAAPWRDRDFLLVYLTRFLVMLGFYLAQTYLQYYLADVVRSFQ
ALGRTLTEAPFQAVALLGLLISLGAALASVPAGRASDRLGRKPLIYLSGAGLGLLMPFLLLFPRYDLLLALALVFGLFYG
VYLAVDWALVADVLKDPEAHATDMGLWQTAIVVPQVLAGAFGRPLDLLNAQTPGLGYQVLYLLAALFFLLGAFGVAGVRR
SR

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43497; Mature: 43497

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHGPSWFLRLSAYWFATSFKWFLVLLVLLPAKVAEVSPPEEKASRLGFLFGLGAVMAIL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
GPPVMGYLSDRLGRRRPFLLWGSLLTAFALLLLVHAPSYTALLFAYLLLQVADDLATGPY
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCH
SALIPDLVPKGERGAASGYMGVLQVSGQVLAGAVGFLLPLAPQAYLAALLNLLGAALSLS
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LVPDRLPKANPRPFLKAMAAPWRDRDFLLVYLTRFLVMLGFYLAQTYLQYYLADVVRSFQ
HCHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGRTLTEAPFQAVALLGLLISLGAALASVPAGRASDRLGRKPLIYLSGAGLGLLMPFLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCHHHHHHHHH
LFPRYDLLLALALVFGLFYGVYLAVDWALVADVLKDPEAHATDMGLWQTAIVVPQVLAGA
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
FGRPLDLLNAQTPGLGYQVLYLLAALFFLLGAFGVAGVRRSR
CCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRHGPSWFLRLSAYWFATSFKWFLVLLVLLPAKVAEVSPPEEKASRLGFLFGLGAVMAIL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
GPPVMGYLSDRLGRRRPFLLWGSLLTAFALLLLVHAPSYTALLFAYLLLQVADDLATGPY
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCH
SALIPDLVPKGERGAASGYMGVLQVSGQVLAGAVGFLLPLAPQAYLAALLNLLGAALSLS
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LVPDRLPKANPRPFLKAMAAPWRDRDFLLVYLTRFLVMLGFYLAQTYLQYYLADVVRSFQ
HCHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGRTLTEAPFQAVALLGLLISLGAALASVPAGRASDRLGRKPLIYLSGAGLGLLMPFLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCHHHHHHHHH
LFPRYDLLLALALVFGLFYGVYLAVDWALVADVLKDPEAHATDMGLWQTAIVVPQVLAGA
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
FGRPLDLLNAQTPGLGYQVLYLLAALFFLLGAFGVAGVRRSR
CCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA