| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980038
Identifier: 55980038
GI number: 55980038
Start: 65117
End: 65998
Strand: Direct
Name: 55980038
Synonym: TTHA0069
Alternate gene names: NA
Gene position: 65117-65998 (Clockwise)
Preceding gene: 55980035
Following gene: 55980039
Centisome position: 3.52
GC content: 71.77
Gene sequence:
>882_bases GTGCACCTCGTAGTACCGCCCCGCCCGCCACAGGCCCAGGACCTCCTCCCAGTCGGGCACCACGCCCCCAGCTTACCGGG CTATACTCGTCCCATGCGCCTCCTCGCCCTCCTCGTCCTGCTGGGGCCGGCCTTGGCCCTGCGGCTCGCCACCACCACCA GCGTCTACGACTCGGGGCTTCTGGACCGGCTCCTAGAGGCCTTCCTCCGGGAAACGGGGATCCGGGTCCAGGTGCTGGCG GTGGGCACGGGCCAGGCCCTGAGGCTTGCGGAGCGGAAGGACGTGGACGCCGTCTTGGTCCACGCCCCCTCCCTGGAGCG GGAGGCCCTGGCCCGGGGGATCACCGCCGAGCCCTACTGCCTGGCCCAAAACGCCTTCCTCCTCGCGGGGCCCGAGGCGG ACCCGGCCCAGGTACGGGAAGCAGAGAACGTTTTAGAGGCCCTGCGGCGCATCGCGGCCCAAAAGGCCCCCTTCGTCTCC CGCGGGGACCGCTCGGGCACCCACCTCAAGGAGCTGGAGCTTTGGGAGAAGGCGGGCCTGAAGCCCCAGGGCCCTTGGTA CCTGGAAAGCGGCGCAGGCATGGGCCAGACCCTCGTCCTGGCGGCGGAGAAGGGGGCCTACACCCTCACCGACCTCGCCA CCTTCCTCACCGTGGGGAAGAGGCGGGGCCTGAAGGCCCTTTACGCCCGGGAGGACCCCCTCCTCCTCAACCAGTACGCC TTCCACCTGGTCCCGGGAAGCCCCGGGGAAGGCGAGGCCCAAAGGCTTAGGGCCTTCCTCGCCTCGGAGGAGGCCGCCCG GATCGTGGCCGGCCTCCGGGTGGAGGGCACCCCCCTCTTCGCCCCCCTTCGGGGCCGGTGCGCCTTCCCCTTGCGCCCCT AG
Upstream 100 bases:
>100_bases CCAAGCGCCTCTGGTGGAGGGCCGCCGCCAAAAGGATCACCCCCTGGAGGAGGCGGCGCTCCTCCCCCGTGGCCTTAAGC CAGTAGGGCTCCAGGACCTC
Downstream 100 bases:
>100_bases CCATGCCCCCTGCCGAGATCCTGGAGATCGCCCTGAGAAGCCTCGCCGTGGCCGGGGGGGCCACCCTCCTCGCCGCCCTC TTCGGGGTGCCCCTCGGCCT
Product: ABC transporter substrate-binding protein
Products: NA
Alternate protein names: Signal Peptide Protein; TUNGstate ABC Transporter Permease; Molybdate Or TUNGstate Transport; TUNGstate ABC Transporter Permease-Like Protein; Signal Peptide; TUNGstate Abc Transporter Permease; ABC-Type Transport Protein Permease Component; ABC Transporter; Basic Organic Compound ABC-Transporter; ABC Transporter Permease Protein; ABC TUNGstate Transporter Permease Component; ABC-Type Transport System Permease Component; ABC Transporter Periplasmic Protein; ABC-Type TUNGstate Transport System Permease Component-Like; Periplasmic Protein
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MHLVVPPRPPQAQDLLPVGHHAPSLPGYTRPMRLLALLVLLGPALALRLATTTSVYDSGLLDRLLEAFLRETGIRVQVLA VGTGQALRLAERKDVDAVLVHAPSLEREALARGITAEPYCLAQNAFLLAGPEADPAQVREAENVLEALRRIAAQKAPFVS RGDRSGTHLKELELWEKAGLKPQGPWYLESGAGMGQTLVLAAEKGAYTLTDLATFLTVGKRRGLKALYAREDPLLLNQYA FHLVPGSPGEGEAQRLRAFLASEEAARIVAGLRVEGTPLFAPLRGRCAFPLRP
Sequences:
>Translated_293_residues MHLVVPPRPPQAQDLLPVGHHAPSLPGYTRPMRLLALLVLLGPALALRLATTTSVYDSGLLDRLLEAFLRETGIRVQVLA VGTGQALRLAERKDVDAVLVHAPSLEREALARGITAEPYCLAQNAFLLAGPEADPAQVREAENVLEALRRIAAQKAPFVS RGDRSGTHLKELELWEKAGLKPQGPWYLESGAGMGQTLVLAAEKGAYTLTDLATFLTVGKRRGLKALYAREDPLLLNQYA FHLVPGSPGEGEAQRLRAFLASEEAARIVAGLRVEGTPLFAPLRGRCAFPLRP >Mature_293_residues MHLVVPPRPPQAQDLLPVGHHAPSLPGYTRPMRLLALLVLLGPALALRLATTTSVYDSGLLDRLLEAFLRETGIRVQVLA VGTGQALRLAERKDVDAVLVHAPSLEREALARGITAEPYCLAQNAFLLAGPEADPAQVREAENVLEALRRIAAQKAPFVS RGDRSGTHLKELELWEKAGLKPQGPWYLESGAGMGQTLVLAAEKGAYTLTDLATFLTVGKRRGLKALYAREDPLLLNQYA FHLVPGSPGEGEAQRLRAFLASEEAARIVAGLRVEGTPLFAPLRGRCAFPLRP
Specific function: Unknown
COG id: COG2998
COG function: function code H; ABC-type tungstate transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31670; Mature: 31670
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLVVPPRPPQAQDLLPVGHHAPSLPGYTRPMRLLALLVLLGPALALRLATTTSVYDSGL CEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDRLLEAFLRETGIRVQVLAVGTGQALRLAERKDVDAVLVHAPSLEREALARGITAEPYC HHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHCCCCEEEEECCCCCHHHHHCCCCCCCEE LAQNAFLLAGPEADPAQVREAENVLEALRRIAAQKAPFVSRGDRSGTHLKELELWEKAGL EECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCC KPQGPWYLESGAGMGQTLVLAAEKGAYTLTDLATFLTVGKRRGLKALYAREDPLLLNQYA CCCCCEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCEEEECEE FHLVPGSPGEGEAQRLRAFLASEEAARIVAGLRVEGTPLFAPLRGRCAFPLRP EEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCEECCCEEECCCCCCCCCCCCC >Mature Secondary Structure MHLVVPPRPPQAQDLLPVGHHAPSLPGYTRPMRLLALLVLLGPALALRLATTTSVYDSGL CEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDRLLEAFLRETGIRVQVLAVGTGQALRLAERKDVDAVLVHAPSLEREALARGITAEPYC HHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHCCCCEEEEECCCCCHHHHHCCCCCCCEE LAQNAFLLAGPEADPAQVREAENVLEALRRIAAQKAPFVSRGDRSGTHLKELELWEKAGL EECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCC KPQGPWYLESGAGMGQTLVLAAEKGAYTLTDLATFLTVGKRRGLKALYAREDPLLLNQYA CCCCCEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCEEEECEE FHLVPGSPGEGEAQRLRAFLASEEAARIVAGLRVEGTPLFAPLRGRCAFPLRP EEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCEECCCEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA