| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980039
Identifier: 55980039
GI number: 55980039
Start: 66001
End: 66636
Strand: Direct
Name: 55980039
Synonym: TTHA0070
Alternate gene names: NA
Gene position: 66001-66636 (Clockwise)
Preceding gene: 55980038
Following gene: 55980040
Centisome position: 3.57
GC content: 73.11
Gene sequence:
>636_bases ATGCCCCCTGCCGAGATCCTGGAGATCGCCCTGAGAAGCCTCGCCGTGGCCGGGGGGGCCACCCTCCTCGCCGCCCTCTT CGGGGTGCCCCTCGGCCTCTGGCTCGCCCTGCGGGGGGGTGGAGGGGTCTGGGGCAGGGTCCTCCTCTACTCCGGGCTCG CCCTGCCCTCGGTGGTGGTGGGCCTCCTCTTCTACCTCCTCCTCTCCCGCTCCGGGCCTCTCGGCTTCCTCAACCTCCTC TACACCCCCTGGGCCATGGTGCTGGCGGAGGCCACCCTGGCCTTCCCCCTGATCGCCGCCTTCGTCCTCTCGGGAGCCCG TGGCCGGGTGGAGGAGGTCCGCCTTCTGGTGCGGAGCCTAGGGGGGAAGGAGCGCCACGTCCTCCCCACCCTCCTCGCGG AAAGCCGCCGCACCCTGGCCGCCGCTTTAGCCGCGGGCTTCGGCGGGGCCATCAGCGAGGTGGGGGCGGCCACCCTGGTG GGGGGGGACATCCGCCACCACACCCGGGTCCTCACCACCGCCATCGTGGTGGAGACCCGCATGGGGGAGCTGCACGCGGC CCTGGCCCTGGGGGCGGTCCTCCTCGGCATCGCCCTCCTGGTCACCGCCTTCCTGGTTATCCTGGAGCGGGAGTGA
Upstream 100 bases:
>100_bases CGGAGGAGGCCGCCCGGATCGTGGCCGGCCTCCGGGTGGAGGGCACCCCCCTCTTCGCCCCCCTTCGGGGCCGGTGCGCC TTCCCCTTGCGCCCCTAGCC
Downstream 100 bases:
>100_bases TCCTTAAGGCGGAGGACCTGACCCTGGCCTTCCCCGGCTTCCGGCTCCGGGTGCCGCGCCTCGCCCTGGCCCCGGGGGAG GTGCTCGTGGTCCTCGGCCC
Product: ABC transporter permease
Products: NA
Alternate protein names: TUNGstate ABC Transporter Permease Protein; ABC Transporter Permease; ABC-Type TUNGstate Transport System Periplasmic Component; Permease Component Of TUNGstate ABC Transporter; Sulfate/TUNGstate ABC Transporter Permease; Permease Component Of ABC Transporter; Molybdenum Transport System Permease Protein ModB; ABC-Type TUNGstate Transport Permease Protein; TUNGstate Permease; Sulfate/TUNGstate Uptake Family ABC Transporter Permease; Sulfate Transport System Permease Protein; ABC-Type Transporter Protein Periplasmic Component; Basic Organic Compound ABC-Transporter; ABC-Type Sulfate Transport System Permease Component; TUNGsten Transporter Permease Protein; Molybdate ABC Transporter Permease ModB; ABC-Type Transport System Permease Subunit; Anion ABC Transporter Permease; TUNGstate ABC Transporter Permease; ABC TUNGstate Transporter Periplasmic Component; ABC-Type Transport System Permease Component; ATP Synthase F0 A Subunit; TUNGstate/Sulfate ABC Transporter Permease; TUNGstate ABC Transporter Membrane Protein; Anion-Uptake ABC-Transport System Permease; Molybdenum ABC Transporter Permease Protein; TUNGstate ABC Transporter Permease Protein TupB
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MPPAEILEIALRSLAVAGGATLLAALFGVPLGLWLALRGGGGVWGRVLLYSGLALPSVVVGLLFYLLLSRSGPLGFLNLL YTPWAMVLAEATLAFPLIAAFVLSGARGRVEEVRLLVRSLGGKERHVLPTLLAESRRTLAAALAAGFGGAISEVGAATLV GGDIRHHTRVLTTAIVVETRMGELHAALALGAVLLGIALLVTAFLVILERE
Sequences:
>Translated_211_residues MPPAEILEIALRSLAVAGGATLLAALFGVPLGLWLALRGGGGVWGRVLLYSGLALPSVVVGLLFYLLLSRSGPLGFLNLL YTPWAMVLAEATLAFPLIAAFVLSGARGRVEEVRLLVRSLGGKERHVLPTLLAESRRTLAAALAAGFGGAISEVGAATLV GGDIRHHTRVLTTAIVVETRMGELHAALALGAVLLGIALLVTAFLVILERE >Mature_210_residues PPAEILEIALRSLAVAGGATLLAALFGVPLGLWLALRGGGGVWGRVLLYSGLALPSVVVGLLFYLLLSRSGPLGFLNLLY TPWAMVLAEATLAFPLIAAFVLSGARGRVEEVRLLVRSLGGKERHVLPTLLAESRRTLAAALAAGFGGAISEVGAATLVG GDIRHHTRVLTTAIVVETRMGELHAALALGAVLLGIALLVTAFLVILERE
Specific function: Unknown
COG id: COG4662
COG function: function code H; ABC-type tungstate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21912; Mature: 21780
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPAEILEIALRSLAVAGGATLLAALFGVPLGLWLALRGGGGVWGRVLLYSGLALPSVVV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHH GLLFYLLLSRSGPLGFLNLLYTPWAMVLAEATLAFPLIAAFVLSGARGRVEEVRLLVRSL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH GGKERHVLPTLLAESRRTLAAALAAGFGGAISEVGAATLVGGDIRHHTRVLTTAIVVETR CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH MGELHAALALGAVLLGIALLVTAFLVILERE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PPAEILEIALRSLAVAGGATLLAALFGVPLGLWLALRGGGGVWGRVLLYSGLALPSVVV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHH GLLFYLLLSRSGPLGFLNLLYTPWAMVLAEATLAFPLIAAFVLSGARGRVEEVRLLVRSL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH GGKERHVLPTLLAESRRTLAAALAAGFGGAISEVGAATLVGGDIRHHTRVLTTAIVVETR CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH MGELHAALALGAVLLGIALLVTAFLVILERE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA