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The map label for this gene is rpmB [H]

Identifier: 55980011

GI number: 55980011

Start: 43369

End: 43665

Strand: Reverse

Name: rpmB [H]

Synonym: TTHA0042

Alternate gene names: 55980011

Gene position: 43665-43369 (Counterclockwise)

Preceding gene: 55980013

Following gene: 55980010

Centisome position: 2.36

GC content: 63.3

Gene sequence:

>297_bases
ATGTCCAAGGTGTGCGAGATCAGCGGAAAGCGGCCCATCGTGGCCAACAGCATCCAAAGGCGGGGTAAGGCCAAGCGGGA
AGGGGGTGTGGGCAAGAAGACCACCGGCATCTCCAAGCGCCGCCAGTACCCCAACCTGCAGAAGGTCCGGGTGCGGGTCG
CCGGCCAGGAGATCACCTTCCGCGTGGCCGCAAGCCACATCCCCAAGGTCTACGAGCTCGTGGAGCGGGCCAAGGGGCTT
AAGCTGGAGGGGCTTTCCCCTAAGGAGATCAAGAAGGAGCTCCTCAAGCTCCTCTAG

Upstream 100 bases:

>100_bases
AAGGCGAGGAGGAGGGGTACGAGCACCGTGGGCATCCCCAAGAGTCTACCCCAGTGTGCTATACTCCTAAAGGTTTGCCT
TCGGGCAGGGGAGGAGAGCC

Downstream 100 bases:

>100_bases
CGTCCCCAGGCCCCGTGCTGGCTTGAGCCTGTACGGGGCAAGAAGGACCTTCCCGCCCCGAGGGGGCGGGGAGCGTTTTT
TGGTCCAGGTTGCGCTGCCT

Product: 50S ribosomal protein L28

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MSKVCEISGKRPIVANSIQRRGKAKREGGVGKKTTGISKRRQYPNLQKVRVRVAGQEITFRVAASHIPKVYELVERAKGL
KLEGLSPKEIKKELLKLL

Sequences:

>Translated_98_residues
MSKVCEISGKRPIVANSIQRRGKAKREGGVGKKTTGISKRRQYPNLQKVRVRVAGQEITFRVAASHIPKVYELVERAKGL
KLEGLSPKEIKKELLKLL
>Mature_97_residues
SKVCEISGKRPIVANSIQRRGKAKREGGVGKKTTGISKRRQYPNLQKVRVRVAGQEITFRVAASHIPKVYELVERAKGLK
LEGLSPKEIKKELLKLL

Specific function: Unknown

COG id: COG0227

COG function: function code J; Ribosomal protein L28

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L28P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001383 [H]

Pfam domain/function: PF00830 Ribosomal_L28 [H]

EC number: NA

Molecular weight: Translated: 10978; Mature: 10847

Theoretical pI: Translated: 11.45; Mature: 11.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKVCEISGKRPIVANSIQRRGKAKREGGVGKKTTGISKRRQYPNLQKVRVRVAGQEITF
CCCCCCCCCCCCHHHHHHHHHCCCHHCCCCCCCCCCCHHHHCCCCHHHHHHHHCCCHHHH
RVAASHIPKVYELVERAKGLKLEGLSPKEIKKELLKLL
HHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
>Mature Secondary Structure 
SKVCEISGKRPIVANSIQRRGKAKREGGVGKKTTGISKRRQYPNLQKVRVRVAGQEITF
CCCCCCCCCCCHHHHHHHHHCCCHHCCCCCCCCCCCHHHHCCCCHHHHHHHHCCCHHHH
RVAASHIPKVYELVERAKGLKLEGLSPKEIKKELLKLL
HHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA