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The map label for this gene is yjbQ [H]

Identifier: 55980013

GI number: 55980013

Start: 44202

End: 45353

Strand: Reverse

Name: yjbQ [H]

Synonym: TTHA0044

Alternate gene names: 55980013

Gene position: 45353-44202 (Counterclockwise)

Preceding gene: 55980014

Following gene: 55980011

Centisome position: 2.45

GC content: 67.36

Gene sequence:

>1152_bases
TTGAGCGGTAGCCTCCTTTTGCTCTTCGTCTTCCTTTCGGCCTTCCTGGCCCCGCCCCTCTCCCGCCTCCTCAGGATGCC
CGTGCCCGTGGGTGAGCTCGTCATCGGCCTCCTCCTCGGCCACTTCCTCGCCCAAGGGGTGGCCCTCCCCGAGATCCTGG
GGTTTTTGGCGGACTTCGGCTTCCTCCTCCTCATGTTCCTCGCGGGGCTAGAGGTGGACTTCAACCTCCTCCGCCAGTTG
GAGCGCCGCCACTTCGTCTTCTACGCCCTTTACGTGGTGGGCATGTTCCTCGGCGCCGGGCTTCTCGCGGGCCTTTTGGG
CGTGGGGCTCGCCCAGGCCCTGATCCTCGCCCTGGTTTCCATCGGCCTTATGGTGGCCACCCTGAGGGACATGGGCATCC
TGGGCCGGGCTTTCGCCAAGCGGGTCCTGATCCTCGGCGTCCTGGGGGAGGTGGCGAGCCTCTTCGGCCTCACCGCCATG
GAGAAGGCGGCCCACTACCAGGGCCTCCTTTCCCTGCTGAAGGAGGTCGGGATCATCGCCCTCTTTTTTCTCCTCCTTTT
CCTCGCCTTCCGCCTGGCGGGCCTCTTCCTCTGGTGGTACCCGGAGGTGGGCCGCAGGCTGGTCTACGAGGAGGACCCGA
GCGCCATGGGCATCCGGCTGAGCCTGGCCCTCATGTTCGCCGCCGCCGTCATGAGCGGTCTGGTGGGGCTGGAGAGCGTC
CTCGGGGCCTTCCTCGCCGGGATGATCCTCTCCTACTTCCTGCAGAAGAAGCACGACCTCGAGGCCAAGCTCAGCGCCAT
GGGCTACGGCTTCCTCATCCCCATCTTCTTCATCCGCACGGGGATGGGGATTGACCTCTCGGGCCTGGACGGCCGCCTCC
TCCTGGAGGTGGGCCAGGCCCTGCTCCTCATGCTCCTCATCCGCCTCCTCCCCGCGCCCTTTCTCCTGTTGGGCGGGTTC
CGCCTGCGGGAGGCCTTCCTCGCGGCCCTCCTCCTCGCCTACCCCTTCACCCTGATGATCGCGGGGACGGAGATCGCCAG
GAGCGCCCACCTCCTGGACGAGCGGGCCGCCCTCGTCCTCCTTCTCGCCGCCGCCCTCTCCTCCCTCCTCTTCCCGTGGG
CGGCCAAGATGCTCCTGCGCTTCCTGCGCTGA

Upstream 100 bases:

>100_bases
TACACCCCGGGGCGCCGCACCGCCTTCTTCCGCCCCTACGTCCCCCAGCTTTTGGCCCAGGCGAGCCCGGTGTCCACCCT
CTTGGTGCCGGAGGTCAACC

Downstream 100 bases:

>100_bases
GGCCTTTGGGGGGCCCCTTTAGATCCAGCGCCGCCTCCGCCTCGGGGCGAGGAGGAGGAGGACCGCCCCCAGGGTCACGC
ACACGTCCGCCAGGTTGAAG

Product: Na(+)/H(+) antiporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 382

Protein sequence:

>383_residues
MSGSLLLLFVFLSAFLAPPLSRLLRMPVPVGELVIGLLLGHFLAQGVALPEILGFLADFGFLLLMFLAGLEVDFNLLRQL
ERRHFVFYALYVVGMFLGAGLLAGLLGVGLAQALILALVSIGLMVATLRDMGILGRAFAKRVLILGVLGEVASLFGLTAM
EKAAHYQGLLSLLKEVGIIALFFLLLFLAFRLAGLFLWWYPEVGRRLVYEEDPSAMGIRLSLALMFAAAVMSGLVGLESV
LGAFLAGMILSYFLQKKHDLEAKLSAMGYGFLIPIFFIRTGMGIDLSGLDGRLLLEVGQALLLMLLIRLLPAPFLLLGGF
RLREAFLAALLLAYPFTLMIAGTEIARSAHLLDERAALVLLLAAALSSLLFPWAAKMLLRFLR

Sequences:

>Translated_383_residues
MSGSLLLLFVFLSAFLAPPLSRLLRMPVPVGELVIGLLLGHFLAQGVALPEILGFLADFGFLLLMFLAGLEVDFNLLRQL
ERRHFVFYALYVVGMFLGAGLLAGLLGVGLAQALILALVSIGLMVATLRDMGILGRAFAKRVLILGVLGEVASLFGLTAM
EKAAHYQGLLSLLKEVGIIALFFLLLFLAFRLAGLFLWWYPEVGRRLVYEEDPSAMGIRLSLALMFAAAVMSGLVGLESV
LGAFLAGMILSYFLQKKHDLEAKLSAMGYGFLIPIFFIRTGMGIDLSGLDGRLLLEVGQALLLMLLIRLLPAPFLLLGGF
RLREAFLAALLLAYPFTLMIAGTEIARSAHLLDERAALVLLLAAALSSLLFPWAAKMLLRFLR
>Mature_382_residues
SGSLLLLFVFLSAFLAPPLSRLLRMPVPVGELVIGLLLGHFLAQGVALPEILGFLADFGFLLLMFLAGLEVDFNLLRQLE
RRHFVFYALYVVGMFLGAGLLAGLLGVGLAQALILALVSIGLMVATLRDMGILGRAFAKRVLILGVLGEVASLFGLTAME
KAAHYQGLLSLLKEVGIIALFFLLLFLAFRLAGLFLWWYPEVGRRLVYEEDPSAMGIRLSLALMFAAAVMSGLVGLESVL
GAFLAGMILSYFLQKKHDLEAKLSAMGYGFLIPIFFIRTGMGIDLSGLDGRLLLEVGQALLLMLLIRLLPAPFLLLGGFR
LREAFLAALLLAYPFTLMIAGTEIARSAHLLDERAALVLLLAAALSSLLFPWAAKMLLRFLR

Specific function: Probable Na(+)/H(+) antiporter [H]

COG id: COG0475

COG function: function code P; Kef-type K+ transport systems, membrane components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006153
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF00999 Na_H_Exchanger; PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 41627; Mature: 41495

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGSLLLLFVFLSAFLAPPLSRLLRMPVPVGELVIGLLLGHFLAQGVALPEILGFLADFG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
FLLLMFLAGLEVDFNLLRQLERRHFVFYALYVVGMFLGAGLLAGLLGVGLAQALILALVS
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGLMVATLRDMGILGRAFAKRVLILGVLGEVASLFGLTAMEKAAHYQGLLSLLKEVGIIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFFLLLFLAFRLAGLFLWWYPEVGRRLVYEEDPSAMGIRLSLALMFAAAVMSGLVGLESV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LGAFLAGMILSYFLQKKHDLEAKLSAMGYGFLIPIFFIRTGMGIDLSGLDGRLLLEVGQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
LLLMLLIRLLPAPFLLLGGFRLREAFLAALLLAYPFTLMIAGTEIARSAHLLDERAALVL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAAALSSLLFPWAAKMLLRFLR
HHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SGSLLLLFVFLSAFLAPPLSRLLRMPVPVGELVIGLLLGHFLAQGVALPEILGFLADFG
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
FLLLMFLAGLEVDFNLLRQLERRHFVFYALYVVGMFLGAGLLAGLLGVGLAQALILALVS
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGLMVATLRDMGILGRAFAKRVLILGVLGEVASLFGLTAMEKAAHYQGLLSLLKEVGIIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFFLLLFLAFRLAGLFLWWYPEVGRRLVYEEDPSAMGIRLSLALMFAAAVMSGLVGLESV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LGAFLAGMILSYFLQKKHDLEAKLSAMGYGFLIPIFFIRTGMGIDLSGLDGRLLLEVGQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
LLLMLLIRLLPAPFLLLGGFRLREAFLAALLLAYPFTLMIAGTEIARSAHLLDERAALVL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAAALSSLLFPWAAKMLLRFLR
HHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]