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The map label for this gene is 55980007

Identifier: 55980007

GI number: 55980007

Start: 39654

End: 40811

Strand: Direct

Name: 55980007

Synonym: TTHA0038

Alternate gene names: NA

Gene position: 39654-40811 (Clockwise)

Preceding gene: 55980006

Following gene: 55980008

Centisome position: 2.14

GC content: 69.86

Gene sequence:

>1158_bases
GTGAGATTTCCCTTTCATAACGGGCCTCTCTGGGCCGAGGCCCTGAGCGACCTCGGGGCTTCCCTCGGCTTTAGCACCCT
CGCCCTAGAAGTGGCCCGCACGGGAGAAGCCTTCTGGGTGGGCTTCTTCGCCGCCCTGGGCTACCTTACCCTAGGGCCTC
TTCTCCTCCTCAGCCCCTGGGTGGAGCGGCGGGACCTGGCCCGGGCTCTCCTGGAGTTGCGCCTGGCCCGGGGCCTCCTC
TTCCTCCCCCTTCCCTTCCTGCCGCGGGAAGCCGCCCTCCTAGTCCTCTACGCTTACCCCCTCATGGTCCTCACCGACCT
GGCCGTCGTGGCCTGGGAAGGCCTCCTGGTGCGGAGAGGCCGGGACAGGCTGGCGGAAAGGAGCGGCAAGCTCTACGCCG
CCTGGGAGGTGGGGGGGCTGGTGGGGGTCGGCCTCGGCCCCGCCCTCTTCGCCCTCCATCCCGCCCTCCCTTATTTCCTT
GCCGCCGGGATCCTCCTCCTGGCCTGGGCCCTTCTCCGCCCCGCCCTTACGGGGGAGAAGGGGGAGAGGGAGGAGGCGGC
GAGGCCCGAGGCCTTGGGGCGGTCCCTCCGTCGCCTCCTGGCCCATGCCCCCCTCAGGCCCTATCTCCTTCTTTCCCTCC
TCTTTACCCTGGCCCACGCCCTCACCACCGCCCTTCTGGGCCTTCTGGCCCTCCGGGCGGGCACCCCGAAAGCCCTCTTC
GGCCTGGTCTTCGTGCTGCAAAGCCTGGGGTACACCCTGGGGAGCTACTTTGCCGGGCGGGTCCCACCGGCCCTGGCCTT
TAGGCTGGGCCCATTAGGGGCAGCCCTCGGGGGGATGGGTTTTCTCCTGCCCTTTCCCCTCCTCCTCGCCGCCCCACCCC
TCTTAGGCCTGGGGGTGGCCCTCCTCAGCACCCACTTGCGGGCGGTGCGGGGCTGGCTCCTGCCCAAGGAGGGCCTGGCC
CCAAGCCTTGCCGCCATCCGCGCCCTCCTCTACGGGGCCGGGGCCCTGGGGGGCCTGGGGGCGGGGGTCCTGGGCAAGGG
GAATCCAGCCCTGCCCCTCCTCGTAGGAGCCTTGGGATTCCTGGTCCTTCTTCCCTTCGCTTTAGGACCCCTCCACCCTA
GGCGACTGGAGGCCTTAAGGCAAGAAGAAGCAGAGTAG

Upstream 100 bases:

>100_bases
CCCTCCTTACCGCCCTCCTGGGCCTCCTTCTCCTCCTGCCCTTGGCCTTGGGGCCCCTGGGGTGCGGGCGGCTCCTCTCC
CTGAGGGAGGGAAGGTTCCC

Downstream 100 bases:

>100_bases
GAATCGTGGGCAAGGAGAATCTACCCCTTCTCGTTTTGGGCCCGTTTCCGGCTAGCCTGTAGGCGTATGACAATAGCCCT
CCTCCTCTGGCTGGAGGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MRFPFHNGPLWAEALSDLGASLGFSTLALEVARTGEAFWVGFFAALGYLTLGPLLLLSPWVERRDLARALLELRLARGLL
FLPLPFLPREAALLVLYAYPLMVLTDLAVVAWEGLLVRRGRDRLAERSGKLYAAWEVGGLVGVGLGPALFALHPALPYFL
AAGILLLAWALLRPALTGEKGEREEAARPEALGRSLRRLLAHAPLRPYLLLSLLFTLAHALTTALLGLLALRAGTPKALF
GLVFVLQSLGYTLGSYFAGRVPPALAFRLGPLGAALGGMGFLLPFPLLLAAPPLLGLGVALLSTHLRAVRGWLLPKEGLA
PSLAAIRALLYGAGALGGLGAGVLGKGNPALPLLVGALGFLVLLPFALGPLHPRRLEALRQEEAE

Sequences:

>Translated_385_residues
MRFPFHNGPLWAEALSDLGASLGFSTLALEVARTGEAFWVGFFAALGYLTLGPLLLLSPWVERRDLARALLELRLARGLL
FLPLPFLPREAALLVLYAYPLMVLTDLAVVAWEGLLVRRGRDRLAERSGKLYAAWEVGGLVGVGLGPALFALHPALPYFL
AAGILLLAWALLRPALTGEKGEREEAARPEALGRSLRRLLAHAPLRPYLLLSLLFTLAHALTTALLGLLALRAGTPKALF
GLVFVLQSLGYTLGSYFAGRVPPALAFRLGPLGAALGGMGFLLPFPLLLAAPPLLGLGVALLSTHLRAVRGWLLPKEGLA
PSLAAIRALLYGAGALGGLGAGVLGKGNPALPLLVGALGFLVLLPFALGPLHPRRLEALRQEEAE
>Mature_385_residues
MRFPFHNGPLWAEALSDLGASLGFSTLALEVARTGEAFWVGFFAALGYLTLGPLLLLSPWVERRDLARALLELRLARGLL
FLPLPFLPREAALLVLYAYPLMVLTDLAVVAWEGLLVRRGRDRLAERSGKLYAAWEVGGLVGVGLGPALFALHPALPYFL
AAGILLLAWALLRPALTGEKGEREEAARPEALGRSLRRLLAHAPLRPYLLLSLLFTLAHALTTALLGLLALRAGTPKALF
GLVFVLQSLGYTLGSYFAGRVPPALAFRLGPLGAALGGMGFLLPFPLLLAAPPLLGLGVALLSTHLRAVRGWLLPKEGLA
PSLAAIRALLYGAGALGGLGAGVLGKGNPALPLLVGALGFLVLLPFALGPLHPRRLEALRQEEAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40825; Mature: 40825

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: PS01189 RIBOSOMAL_S12E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFPFHNGPLWAEALSDLGASLGFSTLALEVARTGEAFWVGFFAALGYLTLGPLLLLSPW
CCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
VERRDLARALLELRLARGLLFLPLPFLPREAALLVLYAYPLMVLTDLAVVAWEGLLVRRG
HHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RDRLAERSGKLYAAWEVGGLVGVGLGPALFALHPALPYFLAAGILLLAWALLRPALTGEK
HHHHHHHCCCEEEEEECCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GEREEAARPEALGRSLRRLLAHAPLRPYLLLSLLFTLAHALTTALLGLLALRAGTPKALF
CCHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
GLVFVLQSLGYTLGSYFAGRVPPALAFRLGPLGAALGGMGFLLPFPLLLAAPPLLGLGVA
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LLSTHLRAVRGWLLPKEGLAPSLAAIRALLYGAGALGGLGAGVLGKGNPALPLLVGALGF
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHH
LVLLPFALGPLHPRRLEALRQEEAE
HHHHHHHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MRFPFHNGPLWAEALSDLGASLGFSTLALEVARTGEAFWVGFFAALGYLTLGPLLLLSPW
CCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
VERRDLARALLELRLARGLLFLPLPFLPREAALLVLYAYPLMVLTDLAVVAWEGLLVRRG
HHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RDRLAERSGKLYAAWEVGGLVGVGLGPALFALHPALPYFLAAGILLLAWALLRPALTGEK
HHHHHHHCCCEEEEEECCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GEREEAARPEALGRSLRRLLAHAPLRPYLLLSLLFTLAHALTTALLGLLALRAGTPKALF
CCHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
GLVFVLQSLGYTLGSYFAGRVPPALAFRLGPLGAALGGMGFLLPFPLLLAAPPLLGLGVA
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LLSTHLRAVRGWLLPKEGLAPSLAAIRALLYGAGALGGLGAGVLGKGNPALPLLVGALGF
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHH
LVLLPFALGPLHPRRLEALRQEEAE
HHHHHHHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA