Click here to switch to the map view.

The map label for this gene is 55980006

Identifier: 55980006

GI number: 55980006

Start: 38506

End: 39657

Strand: Direct

Name: 55980006

Synonym: TTHA0037

Alternate gene names: NA

Gene position: 38506-39657 (Clockwise)

Preceding gene: 55980005

Following gene: 55980007

Centisome position: 2.08

GC content: 71.01

Gene sequence:

>1152_bases
TTGAGGACAAGATACCTTTTCGCCGAGTCCCTAGGCGTCTTCGGGGGGAGCCTGGCCTTCACGGGCCTTGGGCTCCTCCT
GGGCCTTGAAGGAACAACCTGGACCCTGGCCCTCTTGGCCGCTCTCCCCTACCTCACCCTGCCCCTGGACCTCCTCGCCG
GCCTCCTCCTGGACCGGCTGGACCGCAGGACCCTCCTCCTCGCAGGGGTCTGGCTTAGGGCTGGGATCCTGGGCCTCTTC
GCCCTCCTTCCCAAAGAACCCCTCTTCCTCCTCCCCCTGGCCTTCCTCTTCCAGGCCGTCTTGGCCCTGGACCTCCCCGC
CTGGCATGCCCTCCTGGTCCGCCTGGCCCAGGGCAGGCTAGAGCGGGAAGGGGGGAGGCTTCAAGCGGCCCAGCTCCTCG
GGGACGGCCTGGGGGACCTCCTGGCCCCTCCCCTCCTCCTCCTGGCCAAGCCCCTGCCCTTTGCCCTAGGAGGCCTCTTC
CTCGCGGGGGAGGGCCTTCTCCTCCGGGACCTCCCCGCCTACCCGCCTCCACGGGCGGCGAAGGGGGAGGGTTTTACCCT
GAGGGCCCTCCTCGCGGGGCTCGCCTTCCTCCTCGGAGACGGAAGGCTCCTTCCCCTCACCCTCTACGCCCTGGCCCTGA
GCTTCCTCTCCGGGCTGGCCCTGGCTCTCCTGCCCCTCCTGGCCCTGGCCCAGGGGACGCCCCCTGCCCTCTACGGCCTC
TACCCCTTGGGCCTCTCCTTAGGGGGCTTCCTGGGAAGCCTCGCAGCGGGGAGGGTAGGGCCTTGCCTGGGGATTTGGGG
CGGGCACGGGCTGAGGGTCTTGGGGCTTGCCCTCCTCCTCCTGCCCTTTCCTTTCGGGCCTCTGGGCGCTTTCCTTGTGG
GCGGAGGCGGTGCCTTAAGCGGGGTCCACCTACGGGCCTACCGGCAGCGCCTCGCACCGGAGGCCCTCCTGGGTCGGGTG
CAGGCGGGGGCGGTGGCCCTCCTCTCTTCAGGAAGCCTCCTCGGCACCCTCCTGGCGGGGGGCTTGGGGACCCTCGGCCC
CCGGGTGCCCCTCCTTACCGCCCTCCTGGGCCTCCTTCTCCTCCTGCCCTTGGCCTTGGGGCCCCTGGGGTGCGGGCGGC
TCCTCTCCCTGAGGGAGGGAAGGTTCCCGTGA

Upstream 100 bases:

>100_bases
TTCATGCGTGCGCTTTACTCCTGATGGGGAGAAGATGCTCGTGTGCTCGCCACAAAGTGGGGCGATCTGGCAAGTAGAGG
GATTTTCCGACTAGGTCAGC

Downstream 100 bases:

>100_bases
GATTTCCCTTTCATAACGGGCCTCTCTGGGCCGAGGCCCTGAGCGACCTCGGGGCTTCCCTCGGCTTTAGCACCCTCGCC
CTAGAAGTGGCCCGCACGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MRTRYLFAESLGVFGGSLAFTGLGLLLGLEGTTWTLALLAALPYLTLPLDLLAGLLLDRLDRRTLLLAGVWLRAGILGLF
ALLPKEPLFLLPLAFLFQAVLALDLPAWHALLVRLAQGRLEREGGRLQAAQLLGDGLGDLLAPPLLLLAKPLPFALGGLF
LAGEGLLLRDLPAYPPPRAAKGEGFTLRALLAGLAFLLGDGRLLPLTLYALALSFLSGLALALLPLLALAQGTPPALYGL
YPLGLSLGGFLGSLAAGRVGPCLGIWGGHGLRVLGLALLLLPFPFGPLGAFLVGGGGALSGVHLRAYRQRLAPEALLGRV
QAGAVALLSSGSLLGTLLAGGLGTLGPRVPLLTALLGLLLLLPLALGPLGCGRLLSLREGRFP

Sequences:

>Translated_383_residues
MRTRYLFAESLGVFGGSLAFTGLGLLLGLEGTTWTLALLAALPYLTLPLDLLAGLLLDRLDRRTLLLAGVWLRAGILGLF
ALLPKEPLFLLPLAFLFQAVLALDLPAWHALLVRLAQGRLEREGGRLQAAQLLGDGLGDLLAPPLLLLAKPLPFALGGLF
LAGEGLLLRDLPAYPPPRAAKGEGFTLRALLAGLAFLLGDGRLLPLTLYALALSFLSGLALALLPLLALAQGTPPALYGL
YPLGLSLGGFLGSLAAGRVGPCLGIWGGHGLRVLGLALLLLPFPFGPLGAFLVGGGGALSGVHLRAYRQRLAPEALLGRV
QAGAVALLSSGSLLGTLLAGGLGTLGPRVPLLTALLGLLLLLPLALGPLGCGRLLSLREGRFP
>Mature_383_residues
MRTRYLFAESLGVFGGSLAFTGLGLLLGLEGTTWTLALLAALPYLTLPLDLLAGLLLDRLDRRTLLLAGVWLRAGILGLF
ALLPKEPLFLLPLAFLFQAVLALDLPAWHALLVRLAQGRLEREGGRLQAAQLLGDGLGDLLAPPLLLLAKPLPFALGGLF
LAGEGLLLRDLPAYPPPRAAKGEGFTLRALLAGLAFLLGDGRLLPLTLYALALSFLSGLALALLPLLALAQGTPPALYGL
YPLGLSLGGFLGSLAAGRVGPCLGIWGGHGLRVLGLALLLLPFPFGPLGAFLVGGGGALSGVHLRAYRQRLAPEALLGRV
QAGAVALLSSGSLLGTLLAGGLGTLGPRVPLLTALLGLLLLLPLALGPLGCGRLLSLREGRFP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39542; Mature: 39542

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTRYLFAESLGVFGGSLAFTGLGLLLGLEGTTWTLALLAALPYLTLPLDLLAGLLLDRL
CCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRRTLLLAGVWLRAGILGLFALLPKEPLFLLPLAFLFQAVLALDLPAWHALLVRLAQGRL
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
EREGGRLQAAQLLGDGLGDLLAPPLLLLAKPLPFALGGLFLAGEGLLLRDLPAYPPPRAA
HHCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEECCCCCCCCCCC
KGEGFTLRALLAGLAFLLGDGRLLPLTLYALALSFLSGLALALLPLLALAQGTPPALYGL
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
YPLGLSLGGFLGSLAAGRVGPCLGIWGGHGLRVLGLALLLLPFPFGPLGAFLVGGGGALS
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHH
GVHLRAYRQRLAPEALLGRVQAGAVALLSSGSLLGTLLAGGLGTLGPRVPLLTALLGLLL
HHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHCCCCHHHHHHHHHHHHH
LLPLALGPLGCGRLLSLREGRFP
HHHHHHCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MRTRYLFAESLGVFGGSLAFTGLGLLLGLEGTTWTLALLAALPYLTLPLDLLAGLLLDRL
CCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRRTLLLAGVWLRAGILGLFALLPKEPLFLLPLAFLFQAVLALDLPAWHALLVRLAQGRL
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
EREGGRLQAAQLLGDGLGDLLAPPLLLLAKPLPFALGGLFLAGEGLLLRDLPAYPPPRAA
HHCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEECCCCCCCCCCC
KGEGFTLRALLAGLAFLLGDGRLLPLTLYALALSFLSGLALALLPLLALAQGTPPALYGL
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
YPLGLSLGGFLGSLAAGRVGPCLGIWGGHGLRVLGLALLLLPFPFGPLGAFLVGGGGALS
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHH
GVHLRAYRQRLAPEALLGRVQAGAVALLSSGSLLGTLLAGGLGTLGPRVPLLTALLGLLL
HHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHCCCCHHHHHHHHHHHHH
LLPLALGPLGCGRLLSLREGRFP
HHHHHHCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA