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The map label for this gene is pspA [C]

Identifier: 55979977

GI number: 55979977

Start: 8037

End: 8699

Strand: Reverse

Name: pspA [C]

Synonym: TTHA0008

Alternate gene names: 55979977

Gene position: 8699-8037 (Counterclockwise)

Preceding gene: 55979981

Following gene: 55979976

Centisome position: 0.47

GC content: 66.67

Gene sequence:

>663_bases
ATGACCCTTTGGGATCGGCTAAGCCGGCTCGTCCGCGCCAACCTCAACGACCTTTTGCGCCGAGCGGAAGACCCGGAGAA
GATCATTGAGCAGGCCCTTTTGGACATGAAGCAGGCCCTCCGGGAGGCCCGGGAGCAGGTGGCGGAGGCCCTGGCGGAGC
AAAAGCGCCTGGAGCGGGAAGTGGAGAGCCACGAGCGGGAAGCGGCCCTCTGGGAGGAGAAGGCCAGGGAGGCCCTGAAG
GCGGGCCGCGAGGACCTCGCCCGGGAGGCGCTAAGGCGGAAGAAGCGGGCCTTGGACCTGGCGGAGGGCTTCAAAGCGCA
GCTTTCCGAGCACAAGGCCCTCACCGAACGCCTCATGACCCAGCTCAAGGCCCTCGAGGCCAAAATCGACGAGGCCGAGG
CCCGCAAAAAACTCCTCCTCGCCCGGAAGAAGGGGGTGGAGGCCGCCGAAACGGTACGGCGGATGGAGTCGCGCCTGGAC
CAGCACCCGGCCCTGGAGGCCTTTGAGGAGATGGAGGCGAGGATCCTGGCCATGGAGGACCGGCACCAGGCCCTCGAGAC
CCTGGACCAGGCCGACCTGGAGAAGGAGTTCCAGGCCCTTTCCGCCGAAAAGGAGGTGGAGGAAGACCTCCTTCGTCTGA
AGCGGGAGCTCGGACAGGCGTAG

Upstream 100 bases:

>100_bases
TCGGGGCGCGAGTATACGCCCGTCATCCCGACCTTTGCAAGGCAAGCCCACATCCCCCCGGGTCTCCCAAGGGGTATACT
TCGGGGCGAAGGAGGTTCCC

Downstream 100 bases:

>100_bases
ACCGTGGCCCAGACCCAAGACCCAGGGAGTAAACTTCCCTAGGATGAAGCGGTACCTTATGGCCCTCGCCCTTCTCGTCG
CCGCCTGCGCCCCCCAGGTC

Product: phage shock protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MTLWDRLSRLVRANLNDLLRRAEDPEKIIEQALLDMKQALREAREQVAEALAEQKRLEREVESHEREAALWEEKAREALK
AGREDLAREALRRKKRALDLAEGFKAQLSEHKALTERLMTQLKALEAKIDEAEARKKLLLARKKGVEAAETVRRMESRLD
QHPALEAFEEMEARILAMEDRHQALETLDQADLEKEFQALSAEKEVEEDLLRLKRELGQA

Sequences:

>Translated_220_residues
MTLWDRLSRLVRANLNDLLRRAEDPEKIIEQALLDMKQALREAREQVAEALAEQKRLEREVESHEREAALWEEKAREALK
AGREDLAREALRRKKRALDLAEGFKAQLSEHKALTERLMTQLKALEAKIDEAEARKKLLLARKKGVEAAETVRRMESRLD
QHPALEAFEEMEARILAMEDRHQALETLDQADLEKEFQALSAEKEVEEDLLRLKRELGQA
>Mature_219_residues
TLWDRLSRLVRANLNDLLRRAEDPEKIIEQALLDMKQALREAREQVAEALAEQKRLEREVESHEREAALWEEKAREALKA
GREDLAREALRRKKRALDLAEGFKAQLSEHKALTERLMTQLKALEAKIDEAEARKKLLLARKKGVEAAETVRRMESRLDQ
HPALEAFEEMEARILAMEDRHQALETLDQADLEKEFQALSAEKEVEEDLLRLKRELGQA

Specific function: The Phage Shock Protein (Psp) Operon (Pspabce) May Play A Significant Role In The Competition For Survival Under Nutrient- Or Energy-Limited Conditions. Pspa Has A Role As A Negative Regulator, Is Required For Efficient Translocation And Has An Unknown Fu

COG id: COG1842

COG function: function code KT; Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspA/IM30 family [H]

Homologues:

Organism=Escherichia coli, GI2367118, Length=221, Percent_Identity=33.9366515837104, Blast_Score=97, Evalue=9e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007157 [H]

Pfam domain/function: PF04012 PspA_IM30 [H]

EC number: NA

Molecular weight: Translated: 25563; Mature: 25431

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLWDRLSRLVRANLNDLLRRAEDPEKIIEQALLDMKQALREAREQVAEALAEQKRLERE
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VESHEREAALWEEKAREALKAGREDLAREALRRKKRALDLAEGFKAQLSEHKALTERLMT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLKALEAKIDEAEARKKLLLARKKGVEAAETVRRMESRLDQHPALEAFEEMEARILAMED
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
RHQALETLDQADLEKEFQALSAEKEVEEDLLRLKRELGQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLWDRLSRLVRANLNDLLRRAEDPEKIIEQALLDMKQALREAREQVAEALAEQKRLERE
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VESHEREAALWEEKAREALKAGREDLAREALRRKKRALDLAEGFKAQLSEHKALTERLMT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLKALEAKIDEAEARKKLLLARKKGVEAAETVRRMESRLDQHPALEAFEEMEARILAMED
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
RHQALETLDQADLEKEFQALSAEKEVEEDLLRLKRELGQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]