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The map label for this gene is yigM [C]

Identifier: 55979981

GI number: 55979981

Start: 13481

End: 14311

Strand: Reverse

Name: yigM [C]

Synonym: TTHA0012

Alternate gene names: 55979981

Gene position: 14311-13481 (Counterclockwise)

Preceding gene: 55979986

Following gene: 55979977

Centisome position: 0.77

GC content: 70.64

Gene sequence:

>831_bases
ATGCGTGGCTACGTCCTGGGCCTTCTCGCCCTGAACCTCCTCACCCTCATCTGGGGCACCACCTTCGTGGTGGTGAAGGG
GGCGGTGGAGGGGATGGCCCCGAGCCTCCTCATCCTCCTGCGCTTCGGGGTGGCCGCCCTCTTTTTCCTCCCTTGGCTCT
TCCGCCTGCCTGCGGGGGCCTTTGGGCCGGGGATGGAGCTCGCCTTCTGGCTCTTCGTGGGCTACGCCAGCCAGACCCTG
GGGCTCGCCCACACCTCGGCGAGCCGGAGCGCCTTCATCACCGCCCTGAGCGTGGTCCTCGTCCCCCTCCTCCTGAGGCT
TGCCGGCAGGGAGGTGGGCCCGGCCTTCCTCGCGGCCTTTCTGGCCTTGGCCGGGGTGGGCCTCCTATCCTACGACCCCT
ACCAGCCGCCCTTCAACGTGGGGGACCTCTGGACCTTCCTCACCGCCTTGGCCTACGCCCTCTACATCGTCCGCCTCGAG
GTCCACGCCCGGGCCTTCCCCTCCCTCCCCCTCACCGCCGTCCAGGTCTTGGGCACGGCGCTTTTCGCCCTCCCTTGGGT
CCTGGCCGAGGGAGAGGCCTGGGGGCCGGTGGCCTGGGGGGCGGTCCTCTACCTGGGCGTGGTGGCCACCGCCCTCACCA
CCTGGCTCCAGACCTGGGGGCAGAGGCACGTCCCCGCACCCCAGGCGGCCATCCTCTACACCCTGGAGCCCGTCTGGGCC
GCCTTCTTCGCCTACCTCGCCTTGGGGGAGCGCCTAAGCCCTTCCGGGCTCCTCGGGGCCCTCCTGGTGCTTCTCGCGAC
CCTCCTCGCTATCCGCCGATCCCCAGCATGA

Upstream 100 bases:

>100_bases
CGGTAAAGGGGGTCGGGGTGGTCCAGGCGGGCGAGGAGCCTTTCTTGGAGGGCCTGCCGGATGGCCTCGGGCGCGGGCAC
CATGCCTTACACTTTAGGCC

Downstream 100 bases:

>100_bases
CCCGCTTGCGCAGGGTGGGAAGGGTGTTGCCGAAGGCGGGTTTACGGTTCGTGGCGATGAGGATGGCGTCCACCAGGGCC
TCCACGGGCTCGGGGGCGGC

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MRGYVLGLLALNLLTLIWGTTFVVVKGAVEGMAPSLLILLRFGVAALFFLPWLFRLPAGAFGPGMELAFWLFVGYASQTL
GLAHTSASRSAFITALSVVLVPLLLRLAGREVGPAFLAAFLALAGVGLLSYDPYQPPFNVGDLWTFLTALAYALYIVRLE
VHARAFPSLPLTAVQVLGTALFALPWVLAEGEAWGPVAWGAVLYLGVVATALTTWLQTWGQRHVPAPQAAILYTLEPVWA
AFFAYLALGERLSPSGLLGALLVLLATLLAIRRSPA

Sequences:

>Translated_276_residues
MRGYVLGLLALNLLTLIWGTTFVVVKGAVEGMAPSLLILLRFGVAALFFLPWLFRLPAGAFGPGMELAFWLFVGYASQTL
GLAHTSASRSAFITALSVVLVPLLLRLAGREVGPAFLAAFLALAGVGLLSYDPYQPPFNVGDLWTFLTALAYALYIVRLE
VHARAFPSLPLTAVQVLGTALFALPWVLAEGEAWGPVAWGAVLYLGVVATALTTWLQTWGQRHVPAPQAAILYTLEPVWA
AFFAYLALGERLSPSGLLGALLVLLATLLAIRRSPA
>Mature_276_residues
MRGYVLGLLALNLLTLIWGTTFVVVKGAVEGMAPSLLILLRFGVAALFFLPWLFRLPAGAFGPGMELAFWLFVGYASQTL
GLAHTSASRSAFITALSVVLVPLLLRLAGREVGPAFLAAFLALAGVGLLSYDPYQPPFNVGDLWTFLTALAYALYIVRLE
VHARAFPSLPLTAVQVLGTALFALPWVLAEGEAWGPVAWGAVLYLGVVATALTTWLQTWGQRHVPAPQAAILYTLEPVWA
AFFAYLALGERLSPSGLLGALLVLLATLLAIRRSPA

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 29516; Mature: 29516

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGYVLGLLALNLLTLIWGTTFVVVKGAVEGMAPSLLILLRFGVAALFFLPWLFRLPAGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
FGPGMELAFWLFVGYASQTLGLAHTSASRSAFITALSVVLVPLLLRLAGREVGPAFLAAF
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LALAGVGLLSYDPYQPPFNVGDLWTFLTALAYALYIVRLEVHARAFPSLPLTAVQVLGTA
HHHHHCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LFALPWVLAEGEAWGPVAWGAVLYLGVVATALTTWLQTWGQRHVPAPQAAILYTLEPVWA
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
AFFAYLALGERLSPSGLLGALLVLLATLLAIRRSPA
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure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HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]