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The map label for this gene is 54295788

Identifier: 54295788

GI number: 54295788

Start: 3284587

End: 3284853

Strand: Reverse

Name: 54295788

Synonym: lpl2878

Alternate gene names: NA

Gene position: 3284853-3284587 (Counterclockwise)

Preceding gene: 54295789

Following gene: 54295787

Centisome position: 98.18

GC content: 42.32

Gene sequence:

>267_bases
ATGATAAATTACAAAACAATAAAATGGAGATATGGCCTCATTGCACTCTTTGCTTTAGGGGTATCAGGATGTTATTTTGA
CGGGACAAGCCCTCAAGAAAGAGGGTATTCTTACCAAGAAAATAGCATGCCATCCAGTGGAGGACAAACCACCGCTACCA
ATCAATCCCAGCCGCAACAAAAAAGCTATGCGTCAAAGGATACCTCTCAAAAATCTACTCCTGGGCCAAAGCGAACAGCT
GCTCCTCAACTTCCAGTAATTCAATAA

Upstream 100 bases:

>100_bases
GTTTTACAAAAATAGCAAAAATCCAAGGGAGTTTAAATTATTTATAGCAATTCATTCCAATTGATATTTTGTTTAATTAA
CGGATGCAGGAAGCTTAATT

Downstream 100 bases:

>100_bases
AATGAGTTTCCGTTATTATCCTTCATAAGTATTTTGAATATGGGGGATAATTTCTTTTTAGATATCTTAAACTTGCATAT
CTTGGATGGTCAATAATATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MINYKTIKWRYGLIALFALGVSGCYFDGTSPQERGYSYQENSMPSSGGQTTATNQSQPQQKSYASKDTSQKSTPGPKRTA
APQLPVIQ

Sequences:

>Translated_88_residues
MINYKTIKWRYGLIALFALGVSGCYFDGTSPQERGYSYQENSMPSSGGQTTATNQSQPQQKSYASKDTSQKSTPGPKRTA
APQLPVIQ
>Mature_88_residues
MINYKTIKWRYGLIALFALGVSGCYFDGTSPQERGYSYQENSMPSSGGQTTATNQSQPQQKSYASKDTSQKSTPGPKRTA
APQLPVIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9626; Mature: 9626

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINYKTIKWRYGLIALFALGVSGCYFDGTSPQERGYSYQENSMPSSGGQTTATNQSQPQQ
CCCCCCCHHHHHHHHHHHHHCCCEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH
KSYASKDTSQKSTPGPKRTAAPQLPVIQ
HHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MINYKTIKWRYGLIALFALGVSGCYFDGTSPQERGYSYQENSMPSSGGQTTATNQSQPQQ
CCCCCCCHHHHHHHHHHHHHCCCEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH
KSYASKDTSQKSTPGPKRTAAPQLPVIQ
HHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA