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The map label for this gene is higB-2 [H]

Identifier: 54295745

GI number: 54295745

Start: 3233591

End: 3233854

Strand: Reverse

Name: higB-2 [H]

Synonym: lpl2834

Alternate gene names: 54295745

Gene position: 3233854-3233591 (Counterclockwise)

Preceding gene: 54295753

Following gene: 54295744

Centisome position: 96.66

GC content: 34.85

Gene sequence:

>264_bases
ATGATTTTTATTGAAACTCCAATTTTTACAGAAGACGTGAAGGAATTATTATCTGATGAGGAGTATGCTGAGTTTCAAGA
GTATCTTGCTGATAATCCTTTAGCTGGAGACGTAATTCAGCAAACTGGCGGACTGCGAAAAGTTCGATGGTCATTTCAAG
GCAAAGGGAAGCGAGGCAGTGTTAGAATTATTTATTATTATGTAACTCCTGCTTCACAAATAAGACTCTTACTTATTTAT
AAAAAAGTATTCAAGATGATCTGA

Upstream 100 bases:

>100_bases
AGCAAACAAAACGATTGTTTTATATACATGCAAAATACGTCATTGACTTACTTTTATTTAGGATATATACTTTATTCATC
AAAGAAAAATAAGAATAGCA

Downstream 100 bases:

>100_bases
CTACAGATCAAAAGAAAATGTTACGGCAATTAAATGAACGGTGGTAATCATGGATAAAAAATTATTTGAACGATTATACG
AAAGTATGACTCAGATGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MIFIETPIFTEDVKELLSDEEYAEFQEYLADNPLAGDVIQQTGGLRKVRWSFQGKGKRGSVRIIYYYVTPASQIRLLLIY
KKVFKMI

Sequences:

>Translated_87_residues
MIFIETPIFTEDVKELLSDEEYAEFQEYLADNPLAGDVIQQTGGLRKVRWSFQGKGKRGSVRIIYYYVTPASQIRLLLIY
KKVFKMI
>Mature_87_residues
MIFIETPIFTEDVKELLSDEEYAEFQEYLADNPLAGDVIQQTGGLRKVRWSFQGKGKRGSVRIIYYYVTPASQIRLLLIY
KKVFKMI

Specific function: Inhibits translation by cleavage of mRNA [H]

COG id: COG2026

COG function: function code JD; Cytotoxic translational repressor of toxin-antitoxin stability system

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10168; Mature: 10168

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFIETPIFTEDVKELLSDEEYAEFQEYLADNPLAGDVIQQTGGLRKVRWSFQGKGKRGS
CEEECCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHCCCCEEEEEEECCCCCCCC
VRIIYYYVTPASQIRLLLIYKKVFKMI
EEEEEEEECCHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MIFIETPIFTEDVKELLSDEEYAEFQEYLADNPLAGDVIQQTGGLRKVRWSFQGKGKRGS
CEEECCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHCCCCEEEEEEECCCCCCCC
VRIIYYYVTPASQIRLLLIYKKVFKMI
EEEEEEEECCHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]