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The map label for this gene is 54295680

Identifier: 54295680

GI number: 54295680

Start: 3167602

End: 3168636

Strand: Reverse

Name: 54295680

Synonym: lpl2768

Alternate gene names: NA

Gene position: 3168636-3167602 (Counterclockwise)

Preceding gene: 54295681

Following gene: 54295679

Centisome position: 94.71

GC content: 43.29

Gene sequence:

>1035_bases
ATGTTCGAATTAGCTACCCCATGGGCTTTGTCACTCATTCCTGTCCCTTTGTTTCTTTGGTATTTGTTACCGCGGGCAAA
AATAAAATTACCTGCTGCATTGAAGGTTCCTTTTTTTGAGGCAATGGCAGGTATTGTTGAACAAGAGAACCGGTTAATCT
CGGCTAAAACGCTGCTATTAATTCCTGTCTTGGTTTGGGTATTGCTGGTTATCGCCCTTTCTGGTCCGCGATGGGTTGGT
GAGCCAAAGCCTGTAGCAAGGGAAGGATATAATATCATGATGGTATTGGATCTTTCAGGCAGCATGGAAATTACGGATAT
GCTACTGCATGGCCGGCCAGTCAGTCGTTTGCTTGTCGTGAAAAGGGCCGCAGAGCAATTTGTTGAGGACAGAGTCGGAG
ATAGAATCGGTTTGATTCTGTTTGGTACTCGAGCTTATTTGCAAACACCATTAACCTATGACAGACATAGCGTACTAATG
AGGATAGACGACGCAACAGCTGGTCTTGCAGGTAAAACTACTTCGATTGGTGATGCAGTAGGTTTAGCCGTCAAAAGGTT
ACAAGATGTTCCTTCCAAAGGAAGAGTTATTATTTTGCTAACGGACGGAGCAAACAACTCAGGTGTATTAGCCCCCTTAA
AAGCAGCAGAGTTAGCCAAACAAGATGGAATCAAAATCTATACTATAGGCTTAGGTTCGGAGGCCGATCCAAGAGCGTTA
ACTGGTGATTTTTTTGCCCCCACCCTTTCCGCCGAACTGGATGAAAAGACATTGGAAAAAATGGCAAAAATGACAGGTGG
TCGTTATTTCAGGGCGACAGATCCTGAGTCTTTACAATCCATATACCAAACCATCAATCAACTGGAAACCGTGAAGCAAG
AACAGGCAACTGTTCGGCCTCAAAAGGAATATTATCCCTGGTTCGTTGCCTTTGCTTTGTTATTATGCTTTTATTGGTTG
ATTAGCAAGGCGGATTTATTTGTGTACTTAAGGTCTTTTTTAAAAGTAGAGCGGAGCTTAAGTCATGATAGCTGA

Upstream 100 bases:

>100_bases
AATCGATGTTATTGGATTCACCCTATAAAACATCAGATGCACTGAATTTAAATCCTTTATTTACTCGCGCAGAAAAATGG
ATCAAGCAAAGGGGGGCGCC

Downstream 100 bases:

>100_bases
GTTTCATTTTTTAAGGCCATGGTGTTTGTTGATGATAGTGCCTTTGCTTGCATTGGTGGTAATTTATTGGCGGCAAAAAC
CAAAATTACATGCCTGGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MFELATPWALSLIPVPLFLWYLLPRAKIKLPAALKVPFFEAMAGIVEQENRLISAKTLLLIPVLVWVLLVIALSGPRWVG
EPKPVAREGYNIMMVLDLSGSMEITDMLLHGRPVSRLLVVKRAAEQFVEDRVGDRIGLILFGTRAYLQTPLTYDRHSVLM
RIDDATAGLAGKTTSIGDAVGLAVKRLQDVPSKGRVIILLTDGANNSGVLAPLKAAELAKQDGIKIYTIGLGSEADPRAL
TGDFFAPTLSAELDEKTLEKMAKMTGGRYFRATDPESLQSIYQTINQLETVKQEQATVRPQKEYYPWFVAFALLLCFYWL
ISKADLFVYLRSFLKVERSLSHDS

Sequences:

>Translated_344_residues
MFELATPWALSLIPVPLFLWYLLPRAKIKLPAALKVPFFEAMAGIVEQENRLISAKTLLLIPVLVWVLLVIALSGPRWVG
EPKPVAREGYNIMMVLDLSGSMEITDMLLHGRPVSRLLVVKRAAEQFVEDRVGDRIGLILFGTRAYLQTPLTYDRHSVLM
RIDDATAGLAGKTTSIGDAVGLAVKRLQDVPSKGRVIILLTDGANNSGVLAPLKAAELAKQDGIKIYTIGLGSEADPRAL
TGDFFAPTLSAELDEKTLEKMAKMTGGRYFRATDPESLQSIYQTINQLETVKQEQATVRPQKEYYPWFVAFALLLCFYWL
ISKADLFVYLRSFLKVERSLSHDS
>Mature_344_residues
MFELATPWALSLIPVPLFLWYLLPRAKIKLPAALKVPFFEAMAGIVEQENRLISAKTLLLIPVLVWVLLVIALSGPRWVG
EPKPVAREGYNIMMVLDLSGSMEITDMLLHGRPVSRLLVVKRAAEQFVEDRVGDRIGLILFGTRAYLQTPLTYDRHSVLM
RIDDATAGLAGKTTSIGDAVGLAVKRLQDVPSKGRVIILLTDGANNSGVLAPLKAAELAKQDGIKIYTIGLGSEADPRAL
TGDFFAPTLSAELDEKTLEKMAKMTGGRYFRATDPESLQSIYQTINQLETVKQEQATVRPQKEYYPWFVAFALLLCFYWL
ISKADLFVYLRSFLKVERSLSHDS

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 VWFA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002035 [H]

Pfam domain/function: PF00092 VWA [H]

EC number: NA

Molecular weight: Translated: 38268; Mature: 38268

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFELATPWALSLIPVPLFLWYLLPRAKIKLPAALKVPFFEAMAGIVEQENRLISAKTLLL
CCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCEECCHHHHHHHHHHHHCCCCHHHHHHHH
IPVLVWVLLVIALSGPRWVGEPKPVAREGYNIMMVLDLSGSMEITDMLLHGRPVSRLLVV
HHHHHHHHHHHHCCCCCCCCCCCCHHHCCCEEEEEEECCCCCHHHHHHHCCCCHHHHHHH
KRAAEQFVEDRVGDRIGLILFGTRAYLQTPLTYDRHSVLMRIDDATAGLAGKTTSIGDAV
HHHHHHHHHHHCCCEEEEEEEECHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHH
GLAVKRLQDVPSKGRVIILLTDGANNSGVLAPLKAAELAKQDGIKIYTIGLGSEADPRAL
HHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCC
TGDFFAPTLSAELDEKTLEKMAKMTGGRYFRATDPESLQSIYQTINQLETVKQEQATVRP
CCCCCCCHHHHHCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC
QKEYYPWFVAFALLLCFYWLISKADLFVYLRSFLKVERSLSHDS
CHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFELATPWALSLIPVPLFLWYLLPRAKIKLPAALKVPFFEAMAGIVEQENRLISAKTLLL
CCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCEECCHHHHHHHHHHHHCCCCHHHHHHHH
IPVLVWVLLVIALSGPRWVGEPKPVAREGYNIMMVLDLSGSMEITDMLLHGRPVSRLLVV
HHHHHHHHHHHHCCCCCCCCCCCCHHHCCCEEEEEEECCCCCHHHHHHHCCCCHHHHHHH
KRAAEQFVEDRVGDRIGLILFGTRAYLQTPLTYDRHSVLMRIDDATAGLAGKTTSIGDAV
HHHHHHHHHHHCCCEEEEEEEECHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHH
GLAVKRLQDVPSKGRVIILLTDGANNSGVLAPLKAAELAKQDGIKIYTIGLGSEADPRAL
HHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCC
TGDFFAPTLSAELDEKTLEKMAKMTGGRYFRATDPESLQSIYQTINQLETVKQEQATVRP
CCCCCCCHHHHHCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC
QKEYYPWFVAFALLLCFYWLISKADLFVYLRSFLKVERSLSHDS
CHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]