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The map label for this gene is 54295679

Identifier: 54295679

GI number: 54295679

Start: 3166680

End: 3167612

Strand: Reverse

Name: 54295679

Synonym: lpl2767

Alternate gene names: NA

Gene position: 3167612-3166680 (Counterclockwise)

Preceding gene: 54295680

Following gene: 54295678

Centisome position: 94.68

GC content: 39.76

Gene sequence:

>933_bases
ATGATAGCTGAGTTTCATTTTTTAAGGCCATGGTGTTTGTTGATGATAGTGCCTTTGCTTGCATTGGTGGTAATTTATTG
GCGGCAAAAACCAAAATTACATGCCTGGGAGGGGGTATGTGATCCCCATCTTCTGGAACATTTATTACACAGTAAAGGTC
AGAGTAAACGTGCCTTATCTTTATCATTCCTGTTTTTTAGTATTTTATTTATGATTTTGAGTGTGTCTGGTCCAACTTGG
TACAAGTTGCCTCAATCTACTTATAAGCCAATTCAACCAAGGGTTTTGTTATTGGATATGTCAGATAAAATGATGCTTGG
GGATTTATCGCCAAATCGTCTTAGTCGGGCCAAATTCAAATTGCATGATTTATTTACCCGAAAGGATATAGGGCAGTTTG
GTTTGATTGTTTTCACAGGCGAACCTTTTGTTGTATCTCCTTTAACAGACGATGGTCAAACTATCTCTTCCTTATTGTCA
ACCTTGACTCCTGATATCATGCCCGTTGCAGGATATAATTTAGACAGTGCCTTGGATGAAGCAAGCCAATTAATTAAGCA
AGCGGGTTATGACCATGGCGAAATTTTAGTTTTAACCGCTGAAACACCATCCTCTAGCGCTATTGAAAAAGCTAAGAAGC
TGGCAGAATCAGGTATTTTTTCTTCAATTATGCCAATCAGAGCTGATGAAAATTTGAACCCCTTGTTTCAGCGCTTCGCC
AATGCGGGAGATGGATACTTGTTGGTATACTCACCAGATTCAAGTGATTTGGAAAAGTGGTTGAACGCCTCTCAAGGCAA
AGAAAAATTTGCTCTTGAAAAAAATGAAGATATCCCATTATGGCGTGATGAAGGCCGCTGGTTCTTGATTCCCGCATTGC
TTTTATTATTACCCGTATTTCAGCGAGGTTGGATGCAAAGGGTGACGGTATGA

Upstream 100 bases:

>100_bases
GTTGCCTTTGCTTTGTTATTATGCTTTTATTGGTTGATTAGCAAGGCGGATTTATTTGTGTACTTAAGGTCTTTTTTAAA
AGTAGAGCGGAGCTTAAGTC

Downstream 100 bases:

>100_bases
TGTGGCGGGTTTTAACTATTGTGGCAGCTGCACTAATGTCCAATCAACTTAAGGCGTTTAGTTGGTCTGATTTATGGTTT
ACTCCCAATCAACAAGCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; Von Willebrand Factor Type A; TPR Domain Protein; Tetratricopeptide TPR_2 Repeat Protein; Transmembrane Protein; TPR Domain Protein In Aerotolerance Operon; Tetratricopeptide Repeat Family; Unknwon Proteins; Transmembrane TPR Repeat-Containing Protein; Von Willebrand Factor Type A Domain-Containing Protein; Ssl1 Domain Protein; BatB Protein; Batb Protein; BatB/BatC Protein; Tetratricopeptide Repeat And VWA Domain-Containing Protein; Tpr Domain Protein; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MIAEFHFLRPWCLLMIVPLLALVVIYWRQKPKLHAWEGVCDPHLLEHLLHSKGQSKRALSLSFLFFSILFMILSVSGPTW
YKLPQSTYKPIQPRVLLLDMSDKMMLGDLSPNRLSRAKFKLHDLFTRKDIGQFGLIVFTGEPFVVSPLTDDGQTISSLLS
TLTPDIMPVAGYNLDSALDEASQLIKQAGYDHGEILVLTAETPSSSAIEKAKKLAESGIFSSIMPIRADENLNPLFQRFA
NAGDGYLLVYSPDSSDLEKWLNASQGKEKFALEKNEDIPLWRDEGRWFLIPALLLLLPVFQRGWMQRVTV

Sequences:

>Translated_310_residues
MIAEFHFLRPWCLLMIVPLLALVVIYWRQKPKLHAWEGVCDPHLLEHLLHSKGQSKRALSLSFLFFSILFMILSVSGPTW
YKLPQSTYKPIQPRVLLLDMSDKMMLGDLSPNRLSRAKFKLHDLFTRKDIGQFGLIVFTGEPFVVSPLTDDGQTISSLLS
TLTPDIMPVAGYNLDSALDEASQLIKQAGYDHGEILVLTAETPSSSAIEKAKKLAESGIFSSIMPIRADENLNPLFQRFA
NAGDGYLLVYSPDSSDLEKWLNASQGKEKFALEKNEDIPLWRDEGRWFLIPALLLLLPVFQRGWMQRVTV
>Mature_310_residues
MIAEFHFLRPWCLLMIVPLLALVVIYWRQKPKLHAWEGVCDPHLLEHLLHSKGQSKRALSLSFLFFSILFMILSVSGPTW
YKLPQSTYKPIQPRVLLLDMSDKMMLGDLSPNRLSRAKFKLHDLFTRKDIGQFGLIVFTGEPFVVSPLTDDGQTISSLLS
TLTPDIMPVAGYNLDSALDEASQLIKQAGYDHGEILVLTAETPSSSAIEKAKKLAESGIFSSIMPIRADENLNPLFQRFA
NAGDGYLLVYSPDSSDLEKWLNASQGKEKFALEKNEDIPLWRDEGRWFLIPALLLLLPVFQRGWMQRVTV

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35089; Mature: 35089

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAEFHFLRPWCLLMIVPLLALVVIYWRQKPKLHAWEGVCDPHLLEHLLHSKGQSKRALS
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHH
LSFLFFSILFMILSVSGPTWYKLPQSTYKPIQPRVLLLDMSDKMMLGDLSPNRLSRAKFK
HHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEECCCCEEECCCCHHHHHHHHHH
LHDLFTRKDIGQFGLIVFTGEPFVVSPLTDDGQTISSLLSTLTPDIMPVAGYNLDSALDE
HHHHHHHHCCCCEEEEEEECCCEEEECCCCCHHHHHHHHHHHCCCCEECCCCCHHHHHHH
ASQLIKQAGYDHGEILVLTAETPSSSAIEKAKKLAESGIFSSIMPIRADENLNPLFQRFA
HHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCHHHHCCCCCCCCCCCHHHHHHH
NAGDGYLLVYSPDSSDLEKWLNASQGKEKFALEKNEDIPLWRDEGRWFLIPALLLLLPVF
CCCCCEEEEECCCHHHHHHHHCCCCCCHHCCCCCCCCCCCEECCCCEEHHHHHHHHHHHH
QRGWMQRVTV
HHHHHHHCCC
>Mature Secondary Structure
MIAEFHFLRPWCLLMIVPLLALVVIYWRQKPKLHAWEGVCDPHLLEHLLHSKGQSKRALS
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHH
LSFLFFSILFMILSVSGPTWYKLPQSTYKPIQPRVLLLDMSDKMMLGDLSPNRLSRAKFK
HHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEECCCCEEECCCCHHHHHHHHHH
LHDLFTRKDIGQFGLIVFTGEPFVVSPLTDDGQTISSLLSTLTPDIMPVAGYNLDSALDE
HHHHHHHHCCCCEEEEEEECCCEEEECCCCCHHHHHHHHHHHCCCCEECCCCCHHHHHHH
ASQLIKQAGYDHGEILVLTAETPSSSAIEKAKKLAESGIFSSIMPIRADENLNPLFQRFA
HHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCHHHHCCCCCCCCCCCHHHHHHH
NAGDGYLLVYSPDSSDLEKWLNASQGKEKFALEKNEDIPLWRDEGRWFLIPALLLLLPVF
CCCCCEEEEECCCHHHHHHHHCCCCCCHHCCCCCCCCCCCEECCCCEEHHHHHHHHHHHH
QRGWMQRVTV
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA