| Definition | Legionella pneumophila str. Lens, complete genome. |
|---|---|
| Accession | NC_006369 |
| Length | 3,345,687 |
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The map label for this gene is cqsS [H]
Identifier: 54295572
GI number: 54295572
Start: 3029469
End: 3030758
Strand: Reverse
Name: cqsS [H]
Synonym: lpl2659
Alternate gene names: 54295572
Gene position: 3030758-3029469 (Counterclockwise)
Preceding gene: 54295577
Following gene: 54295570
Centisome position: 90.59
GC content: 34.65
Gene sequence:
>1290_bases ATGTCACAACTAAAAAAAATAGTGAAACATTTAGATGAATCAATGCAGCGTAGTTTGTCTAATTCTGCTCATCAATTGGT TGCAGTAGGCGCGATAGCTTTTGTGGGATTTCCTTTATTTTATGTTATTTGGGCTTTCTGGTTGCCTCAGCCTTATGAAA ACCTGCCACTCCGTCTTATTGGAAGCCTTTTAGGTTTGGGATTGATGCTTACTCCTTATTGGCCATTAAAATGGAAGCAA TATTTATCTTGGTATTGGTTTTTAACTCTTTTGTTCACTTTGCCATATTTTTTTACTTTTTTATTTTTAATGAATCAAGC AAGCGTTATTTCTGCGATGTCTTTGTTGTGTGGTGTATTTTTACTTGTATTGCTCGTTGATTTATTGAGTTTATCCATTG TACTGATACTGGGGTTTAGTTTAGCCCTTGTAAGTTATTATCTTGTTTCTCCGCAAATTTATTTTGGAGAAGAGCATATA CAAATGACATTGGTGATCATATTTACCATTATTGCAGGTTCTACTTTAAATTATAAAACAGCCATGTTGCAACAACAAAA ATTGGCTGGTATGGCTGCTGCTGCAGGCATGATTGCCCATGAATTGCGTTCACCATTGTTAGGAATAAAGAGCGGCGCTC AAGCTTTAGTCCAATATTTGCCAAGATTGATTGATGGTTATCAATTGGCTAAAAAACAAGAGTTAATATCTTCACCTTTA CGTGACAGATTGTTATTACAGCTTGGGGGAGTCAGCAATCGAATTGTTAGTGAAATTGATTATGCTAATACGATCATTGA TATGTTATTAGTCAAGGCAAGTCGCGATAATATTTTGCAAAATTGCATATTAGAGACTTGTTCTATAGCAGAATGTTTGT CTGAGGCTATTACCAGATACCCATTTCAGTCACCAAGAGAAAGAACATTAATCACATGGACTGGTGATTTTCAATTTAAA GGCTCTAAGTTGTTAATGCAGCATATTTTATTTAATTTAATAAAAAATGCACTTTATGTTATCGCAATGGCGCAGCGTGG GGAGATTAATATTTGGACTGAATCTGGCGATAAGTATCATTATTTGTATTTTAAAGACACAGCAAAAGGGATGAGCAAAC AACAATTAAATCGATTATTTAATCATTTCTATACTACTACCTTTATGGGAACAGGCATTGGTTTATCATTTTGTAAATTA GTTATGAATGCGTTTGGTGGTGATATTGTTTGTGAATCTAAAGAGGGCGAATACGCTTTGTTTATACTGAGTTTTCCAGG CTCGGCTTAA
Upstream 100 bases:
>100_bases GCATATCTCATGCACAATCCCTATATTTTATGATAGGCTTTTCCAGTAGATAAAGCGCTGAAAATCACGGGCGTTTTTTA GCTTGATTTAAGGATAAGGA
Downstream 100 bases:
>100_bases AATTGGTTTTCTGTTGAACATACCATCATTCGTCTTAAAAGACGTAAGGATGGTATTGAGTTAGAGAGCTCCTGTTATTC TCTTCTGCTAGAGTTTCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Cholerae quorum-sensing sensor [H]
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MSQLKKIVKHLDESMQRSLSNSAHQLVAVGAIAFVGFPLFYVIWAFWLPQPYENLPLRLIGSLLGLGLMLTPYWPLKWKQ YLSWYWFLTLLFTLPYFFTFLFLMNQASVISAMSLLCGVFLLVLLVDLLSLSIVLILGFSLALVSYYLVSPQIYFGEEHI QMTLVIIFTIIAGSTLNYKTAMLQQQKLAGMAAAAGMIAHELRSPLLGIKSGAQALVQYLPRLIDGYQLAKKQELISSPL RDRLLLQLGGVSNRIVSEIDYANTIIDMLLVKASRDNILQNCILETCSIAECLSEAITRYPFQSPRERTLITWTGDFQFK GSKLLMQHILFNLIKNALYVIAMAQRGEINIWTESGDKYHYLYFKDTAKGMSKQQLNRLFNHFYTTTFMGTGIGLSFCKL VMNAFGGDIVCESKEGEYALFILSFPGSA
Sequences:
>Translated_429_residues MSQLKKIVKHLDESMQRSLSNSAHQLVAVGAIAFVGFPLFYVIWAFWLPQPYENLPLRLIGSLLGLGLMLTPYWPLKWKQ YLSWYWFLTLLFTLPYFFTFLFLMNQASVISAMSLLCGVFLLVLLVDLLSLSIVLILGFSLALVSYYLVSPQIYFGEEHI QMTLVIIFTIIAGSTLNYKTAMLQQQKLAGMAAAAGMIAHELRSPLLGIKSGAQALVQYLPRLIDGYQLAKKQELISSPL RDRLLLQLGGVSNRIVSEIDYANTIIDMLLVKASRDNILQNCILETCSIAECLSEAITRYPFQSPRERTLITWTGDFQFK GSKLLMQHILFNLIKNALYVIAMAQRGEINIWTESGDKYHYLYFKDTAKGMSKQQLNRLFNHFYTTTFMGTGIGLSFCKL VMNAFGGDIVCESKEGEYALFILSFPGSA >Mature_428_residues SQLKKIVKHLDESMQRSLSNSAHQLVAVGAIAFVGFPLFYVIWAFWLPQPYENLPLRLIGSLLGLGLMLTPYWPLKWKQY LSWYWFLTLLFTLPYFFTFLFLMNQASVISAMSLLCGVFLLVLLVDLLSLSIVLILGFSLALVSYYLVSPQIYFGEEHIQ MTLVIIFTIIAGSTLNYKTAMLQQQKLAGMAAAAGMIAHELRSPLLGIKSGAQALVQYLPRLIDGYQLAKKQELISSPLR DRLLLQLGGVSNRIVSEIDYANTIIDMLLVKASRDNILQNCILETCSIAECLSEAITRYPFQSPRERTLITWTGDFQFKG SKLLMQHILFNLIKNALYVIAMAQRGEINIWTESGDKYHYLYFKDTAKGMSKQQLNRLFNHFYTTTFMGTGIGLSFCKLV MNAFGGDIVCESKEGEYALFILSFPGSA
Specific function: Senses the quorum-sensing autoinducer CAI-1 ((S)-3- hydroxytridecan-4-one) which probably functions as an intragenus signal. The sensory signal is then relayed to luxU and luxO [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788549, Length=252, Percent_Identity=27.3809523809524, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 48465; Mature: 48334
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQLKKIVKHLDESMQRSLSNSAHQLVAVGAIAFVGFPLFYVIWAFWLPQPYENLPLRLI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH GSLLGLGLMLTPYWPLKWKQYLSWYWFLTLLFTLPYFFTFLFLMNQASVISAMSLLCGVF HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLVLLVDLLSLSIVLILGFSLALVSYYLVSPQIYFGEEHIQMTLVIIFTIIAGSTLNYKT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHCCCCCHHH AMLQQQKLAGMAAAAGMIAHELRSPLLGIKSGAQALVQYLPRLIDGYQLAKKQELISSPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH RDRLLLQLGGVSNRIVSEIDYANTIIDMLLVKASRDNILQNCILETCSIAECLSEAITRY HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PFQSPRERTLITWTGDFQFKGSKLLMQHILFNLIKNALYVIAMAQRGEINIWTESGDKYH CCCCCCCCEEEEEECCCEECCHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCEEE YLYFKDTAKGMSKQQLNRLFNHFYTTTFMGTGIGLSFCKLVMNAFGGDIVCESKEGEYAL EEEEECHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCEEE FILSFPGSA EEEECCCCC >Mature Secondary Structure SQLKKIVKHLDESMQRSLSNSAHQLVAVGAIAFVGFPLFYVIWAFWLPQPYENLPLRLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH GSLLGLGLMLTPYWPLKWKQYLSWYWFLTLLFTLPYFFTFLFLMNQASVISAMSLLCGVF HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLVLLVDLLSLSIVLILGFSLALVSYYLVSPQIYFGEEHIQMTLVIIFTIIAGSTLNYKT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHCCCCCHHH AMLQQQKLAGMAAAAGMIAHELRSPLLGIKSGAQALVQYLPRLIDGYQLAKKQELISSPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH RDRLLLQLGGVSNRIVSEIDYANTIIDMLLVKASRDNILQNCILETCSIAECLSEAITRY HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PFQSPRERTLITWTGDFQFKGSKLLMQHILFNLIKNALYVIAMAQRGEINIWTESGDKYH CCCCCCCCEEEEEECCCEECCHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCEEE YLYFKDTAKGMSKQQLNRLFNHFYTTTFMGTGIGLSFCKLVMNAFGGDIVCESKEGEYAL EEEEECHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCEEE FILSFPGSA EEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA