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The map label for this gene is dotD

Identifier: 54295514

GI number: 54295514

Start: 2968136

End: 2968627

Strand: Direct

Name: dotD

Synonym: lpl2601

Alternate gene names: NA

Gene position: 2968136-2968627 (Clockwise)

Preceding gene: 54295513

Following gene: 54295515

Centisome position: 88.72

GC content: 39.63

Gene sequence:

>492_bases
ATGAACAACAATAAGATTGTCATAATGTTTATTTTTTCAGCGCTTCTTGCTGGCTGCGCTGGAACAATGAAATTTAAAAA
ACCACCCATCAATAATCCAAGTGATGATGCGACTATTAAATTAGCAGAAGCTGCCGTTTCAGTCAGTGACTCCATGCTTG
AAATGGCAAAAGTTGAAAAAGTAATTACTCCACCAAGCAAAGACAATACCTTAACTATACCTAATGCTTATAATTTGCAA
GCAAGAGCCAGTGTCGATTGGTCTGGTCCGATTGAAGAATTGACTGCGCGTATCGCCAAAGCAGCACATTTCAGATTTCG
TGTTTTAGGCAAGTCGCCTTCAGTTCCAGTTTTAGTCAGCATCAGTACCAAAGACGAGAATCTGGCCGAGATCCTTAGAG
ATATTGATTATCAAGCTGGGAAAAAAGCCAGTATTCATGTGTATCCTAACAGTCAGGTCGTAGAATTGCGCTATGCGAAA
ATTTATTCTTAG

Upstream 100 bases:

>100_bases
TTTATGGATTATTTGAAAAACTCTAACAAACAATGTCTTGACAACAAGCCTTCCTCCTGTTTCAATCAAACTAATATTTC
CAAATGGTAAAGAACATTGA

Downstream 100 bases:

>100_bases
TTTATCTATTTTGCTATCAGCCCTCCTGGTAGCCTGTTCTTCTCGTAATCATTACGGGGATACTGGCTCATTGGCAGGCC
TTCAAGCGATGGCTGATTCA

Product: lipoprotein DotD

Products: NA

Alternate protein names: DotD Protein

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MNNNKIVIMFIFSALLAGCAGTMKFKKPPINNPSDDATIKLAEAAVSVSDSMLEMAKVEKVITPPSKDNTLTIPNAYNLQ
ARASVDWSGPIEELTARIAKAAHFRFRVLGKSPSVPVLVSISTKDENLAEILRDIDYQAGKKASIHVYPNSQVVELRYAK
IYS

Sequences:

>Translated_163_residues
MNNNKIVIMFIFSALLAGCAGTMKFKKPPINNPSDDATIKLAEAAVSVSDSMLEMAKVEKVITPPSKDNTLTIPNAYNLQ
ARASVDWSGPIEELTARIAKAAHFRFRVLGKSPSVPVLVSISTKDENLAEILRDIDYQAGKKASIHVYPNSQVVELRYAK
IYS
>Mature_163_residues
MNNNKIVIMFIFSALLAGCAGTMKFKKPPINNPSDDATIKLAEAAVSVSDSMLEMAKVEKVITPPSKDNTLTIPNAYNLQ
ARASVDWSGPIEELTARIAKAAHFRFRVLGKSPSVPVLVSISTKDENLAEILRDIDYQAGKKASIHVYPNSQVVELRYAK
IYS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17852; Mature: 17852

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNNKIVIMFIFSALLAGCAGTMKFKKPPINNPSDDATIKLAEAAVSVSDSMLEMAKVEK
CCCCEEEEHHHHHHHHHCCCCCCEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHH
VITPPSKDNTLTIPNAYNLQARASVDWSGPIEELTARIAKAAHFRFRVLGKSPSVPVLVS
HCCCCCCCCEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCEEEE
ISTKDENLAEILRDIDYQAGKKASIHVYPNSQVVELRYAKIYS
EECCCCHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEEEEECC
>Mature Secondary Structure
MNNNKIVIMFIFSALLAGCAGTMKFKKPPINNPSDDATIKLAEAAVSVSDSMLEMAKVEK
CCCCEEEEHHHHHHHHHCCCCCCEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHH
VITPPSKDNTLTIPNAYNLQARASVDWSGPIEELTARIAKAAHFRFRVLGKSPSVPVLVS
HCCCCCCCCEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCEEEE
ISTKDENLAEILRDIDYQAGKKASIHVYPNSQVVELRYAKIYS
EECCCCHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA