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The map label for this gene is uspE [H]

Identifier: 54295223

GI number: 54295223

Start: 2626295

End: 2627233

Strand: Direct

Name: uspE [H]

Synonym: lpl2306

Alternate gene names: 54295223

Gene position: 2626295-2627233 (Clockwise)

Preceding gene: 54295222

Following gene: 54295224

Centisome position: 78.5

GC content: 40.68

Gene sequence:

>939_bases
ATGCATCGATTTCACAATATCTTATTCGTCAGTCATGGAATCAAAGAAGAAACAGAAGCGTTGCAGTTGGCATTAAGACT
AGCTGCTGAAAGTCAGGCACAACTTCGTATCTTAATTACTTGCCCTCCTTTCCCGGATACACTGAGCGAGTACAAAGCCA
GCTATGAAGAGTACTTGGTTGACAAGATGAACAAAACCATCCAATTGGCTAAATCAGGTCTTGGTTTCTCTAAAAAGAAA
ATCCACATTCCTATTGAAGTCGAGTGTGGCAGTATGCCCGATGTCCGAATTATTCGTCATGTCCTTAAGCACTCTCATGA
CCTTCTCATTAAAGAAGCAGAAACGCCAGAAAGCAAAAAAGGTTTTAAAGCGGTAGACATGGAATTATTACGCAAATGTC
CTTGCGCCTTGTTTCTTTATCGCCCTCTAAAGAACACGTTGCAAGACATTCGAGTGGCAGTAGCAATCGACCCCAAAGAC
GAAGAATCTGTTGCACAGGATTTATCCGTTCGTTTGTTGGATGTGTCTCATTCATTGAATGCCTTTTATCAGGGTAATTT
ACGCATTGTTTCATGCTGGGATTTTGTCCTGGAGAATTACTTGCGTGATAGCGTTTGGCTAAAAATCTCTGAAACCGAAC
TTGAGAAAATGGTCGTTGAAGAAAAACATACTCATAGTTTACTCCTAAGAGAGCTGATCAAACGCTCTCACATTTCCGGA
GAATATCACATTGAGCATCTGAAAGGACATCCTGAGGATGCTATCCCCCACCTTATAACCCATAAAAAAATCGATATTTT
AGTCATGGGTACGATCGCCCGAACCGGAATAGCGGGATTTATTATTGGCAATACGGCGGAAAATATATTGCAGAAAATTA
ATTGTTCCCTATTGGCATTAAAACCACAAGGTTTTGTTTCTCCTGTCAAAGCGTATTAA

Upstream 100 bases:

>100_bases
GGTCAATACATGTAAAAACCAGAGAGGTAAAAATCAGGGAGCAATGATGATTCAAACAGGGATTTGAAAAGTTGCTCCTC
TCTTTCAAGGAGGAGAAGTG

Downstream 100 bases:

>100_bases
TCCGGGAGAAGAGGAGAATGGTGGAACAACAAAATAGTTCAGAGTCAAACTGGCATGAGCACTCAATAGAACAAACACTT
GTTACGCTAAACACTACAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MHRFHNILFVSHGIKEETEALQLALRLAAESQAQLRILITCPPFPDTLSEYKASYEEYLVDKMNKTIQLAKSGLGFSKKK
IHIPIEVECGSMPDVRIIRHVLKHSHDLLIKEAETPESKKGFKAVDMELLRKCPCALFLYRPLKNTLQDIRVAVAIDPKD
EESVAQDLSVRLLDVSHSLNAFYQGNLRIVSCWDFVLENYLRDSVWLKISETELEKMVVEEKHTHSLLLRELIKRSHISG
EYHIEHLKGHPEDAIPHLITHKKIDILVMGTIARTGIAGFIIGNTAENILQKINCSLLALKPQGFVSPVKAY

Sequences:

>Translated_312_residues
MHRFHNILFVSHGIKEETEALQLALRLAAESQAQLRILITCPPFPDTLSEYKASYEEYLVDKMNKTIQLAKSGLGFSKKK
IHIPIEVECGSMPDVRIIRHVLKHSHDLLIKEAETPESKKGFKAVDMELLRKCPCALFLYRPLKNTLQDIRVAVAIDPKD
EESVAQDLSVRLLDVSHSLNAFYQGNLRIVSCWDFVLENYLRDSVWLKISETELEKMVVEEKHTHSLLLRELIKRSHISG
EYHIEHLKGHPEDAIPHLITHKKIDILVMGTIARTGIAGFIIGNTAENILQKINCSLLALKPQGFVSPVKAY
>Mature_312_residues
MHRFHNILFVSHGIKEETEALQLALRLAAESQAQLRILITCPPFPDTLSEYKASYEEYLVDKMNKTIQLAKSGLGFSKKK
IHIPIEVECGSMPDVRIIRHVLKHSHDLLIKEAETPESKKGFKAVDMELLRKCPCALFLYRPLKNTLQDIRVAVAIDPKD
EESVAQDLSVRLLDVSHSLNAFYQGNLRIVSCWDFVLENYLRDSVWLKISETELEKMVVEEKHTHSLLLRELIKRSHISG
EYHIEHLKGHPEDAIPHLITHKKIDILVMGTIARTGIAGFIIGNTAENILQKINCSLLALKPQGFVSPVKAY

Specific function: Required for resistance to DNA-damaging agents [H]

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

Organism=Escherichia coli, GI1787594, Length=318, Percent_Identity=24.8427672955975, Blast_Score=85, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 35482; Mature: 35482

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRFHNILFVSHGIKEETEALQLALRLAAESQAQLRILITCPPFPDTLSEYKASYEEYLV
CCCHHEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH
DKMNKTIQLAKSGLGFSKKKIHIPIEVECGSMPDVRIIRHVLKHSHDLLIKEAETPESKK
HHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCC
GFKAVDMELLRKCPCALFLYRPLKNTLQDIRVAVAIDPKDEESVAQDLSVRLLDVSHSLN
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHEEEEEECCCCC
AFYQGNLRIVSCWDFVLENYLRDSVWLKISETELEKMVVEEKHTHSLLLRELIKRSHISG
CEEECCEEEEHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EYHIEHLKGHPEDAIPHLITHKKIDILVMGTIARTGIAGFIIGNTAENILQKINCSLLAL
CEEEHCCCCCCCHHHHHHHCCCCEEEEEEECHHHCCCEEEEECCCHHHHHHHCCCEEEEE
KPQGFVSPVKAY
CCCCCCCCCCCC
>Mature Secondary Structure
MHRFHNILFVSHGIKEETEALQLALRLAAESQAQLRILITCPPFPDTLSEYKASYEEYLV
CCCHHEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH
DKMNKTIQLAKSGLGFSKKKIHIPIEVECGSMPDVRIIRHVLKHSHDLLIKEAETPESKK
HHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCC
GFKAVDMELLRKCPCALFLYRPLKNTLQDIRVAVAIDPKDEESVAQDLSVRLLDVSHSLN
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHEEEEEECCCCC
AFYQGNLRIVSCWDFVLENYLRDSVWLKISETELEKMVVEEKHTHSLLLRELIKRSHISG
CEEECCEEEEHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EYHIEHLKGHPEDAIPHLITHKKIDILVMGTIARTGIAGFIIGNTAENILQKINCSLLAL
CEEEHCCCCCCCHHHHHHHCCCCEEEEEEECHHHCCCEEEEECCCHHHHHHHCCCEEEEE
KPQGFVSPVKAY
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]