Click here to switch to the map view.

The map label for this gene is 54294947

Identifier: 54294947

GI number: 54294947

Start: 2269665

End: 2270516

Strand: Direct

Name: 54294947

Synonym: lpl2026

Alternate gene names: NA

Gene position: 2269665-2270516 (Clockwise)

Preceding gene: 54294937

Following gene: 54294948

Centisome position: 67.84

GC content: 38.5

Gene sequence:

>852_bases
GTGCTCTTTTATATCCAGGTTATCTTCATGAATGAAAAATTAATTGAAACCCAATCTAACCTCATCAAACAAGCGGAAAC
AGAACTCATTCAATCTAACCAGCTGCTGGAGTCTTTACAACAGGAGAAAGGGCTACAGGAAGAATCCGACTTGGATGAAT
TGGACTCACTCAAATCCCTTATTCTGGTTTTGCAATACAGACTGGATACACAAAATGCCTTAAGCCAGTTAGGTCATTTA
CAACAATACCTGCTGCAATTATTAGGGATAGAAGCCAAGCATTCTTTTGAATTCAATCTGGAGCGATTAGCTTTTGCTTT
GGGAACAGACGAATTAAAACAAATTCTGGCTATGCTTCATCATTTGGTAGATTCGTTATTACGTGTTATTGCTCAAAAAC
AGCTTAAAGAATCTCATGACAAAAGGAAATCACTTGAACAAACCAAGCAATTCAAACCAATAGATACCTTGGTTAAGGTT
TTGAATAAGCAAAAATTATTTATGGCGAAACTCGAGGAGTTAAAGCTGGTTCTTGAAAACATTGGTGGAGCTCCACAACC
AGGCATAATCTATGACCATATTGCTGCTTTACAAGGACCCATATCCCGCTTCTACCAGGCACTACAACATGGCTTGGGCA
TAAGTAACTCTCTTTATCAACAGTTACAGAAAAAGAATCAATTAAGTTATCAATTACCTGATACCTTGCTTAAACCAGAA
CACGTTATTCGCGATATGAACTTTCATCCCGAATCGCAGCGACTGTTCAAAACAACATTGGAGCGCAATAAGATAGAGAA
CCTTGAGGAACGAGCTGCGGCCAAAAGGCTCGGGCATTTTTTTAATCATTAA

Upstream 100 bases:

>100_bases
GTTCCATATTTATTTCTTTTTATTGAATTTTCCTAGAATAATACAAAATACCACAAGACCGCAAAAACTTACGATTCATG
GTATCATAATAATATAGATA

Downstream 100 bases:

>100_bases
CCCCAATAAACTACTTACTGCCTCAATAAAATTTAAACTCATACCCAGTAACAACTTTGTACAAAAATAAATCAAATAGT
CCCGTGTAGTCTATACTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MLFYIQVIFMNEKLIETQSNLIKQAETELIQSNQLLESLQQEKGLQEESDLDELDSLKSLILVLQYRLDTQNALSQLGHL
QQYLLQLLGIEAKHSFEFNLERLAFALGTDELKQILAMLHHLVDSLLRVIAQKQLKESHDKRKSLEQTKQFKPIDTLVKV
LNKQKLFMAKLEELKLVLENIGGAPQPGIIYDHIAALQGPISRFYQALQHGLGISNSLYQQLQKKNQLSYQLPDTLLKPE
HVIRDMNFHPESQRLFKTTLERNKIENLEERAAAKRLGHFFNH

Sequences:

>Translated_283_residues
MLFYIQVIFMNEKLIETQSNLIKQAETELIQSNQLLESLQQEKGLQEESDLDELDSLKSLILVLQYRLDTQNALSQLGHL
QQYLLQLLGIEAKHSFEFNLERLAFALGTDELKQILAMLHHLVDSLLRVIAQKQLKESHDKRKSLEQTKQFKPIDTLVKV
LNKQKLFMAKLEELKLVLENIGGAPQPGIIYDHIAALQGPISRFYQALQHGLGISNSLYQQLQKKNQLSYQLPDTLLKPE
HVIRDMNFHPESQRLFKTTLERNKIENLEERAAAKRLGHFFNH
>Mature_283_residues
MLFYIQVIFMNEKLIETQSNLIKQAETELIQSNQLLESLQQEKGLQEESDLDELDSLKSLILVLQYRLDTQNALSQLGHL
QQYLLQLLGIEAKHSFEFNLERLAFALGTDELKQILAMLHHLVDSLLRVIAQKQLKESHDKRKSLEQTKQFKPIDTLVKV
LNKQKLFMAKLEELKLVLENIGGAPQPGIIYDHIAALQGPISRFYQALQHGLGISNSLYQQLQKKNQLSYQLPDTLLKPE
HVIRDMNFHPESQRLFKTTLERNKIENLEERAAAKRLGHFFNH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32798; Mature: 32798

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFYIQVIFMNEKLIETQSNLIKQAETELIQSNQLLESLQQEKGLQEESDLDELDSLKSL
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
ILVLQYRLDTQNALSQLGHLQQYLLQLLGIEAKHSFEFNLERLAFALGTDELKQILAMLH
HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHH
HLVDSLLRVIAQKQLKESHDKRKSLEQTKQFKPIDTLVKVLNKQKLFMAKLEELKLVLEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGGAPQPGIIYDHIAALQGPISRFYQALQHGLGISNSLYQQLQKKNQLSYQLPDTLLKPE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHCHH
HVIRDMNFHPESQRLFKTTLERNKIENLEERAAAKRLGHFFNH
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLFYIQVIFMNEKLIETQSNLIKQAETELIQSNQLLESLQQEKGLQEESDLDELDSLKSL
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
ILVLQYRLDTQNALSQLGHLQQYLLQLLGIEAKHSFEFNLERLAFALGTDELKQILAMLH
HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHH
HLVDSLLRVIAQKQLKESHDKRKSLEQTKQFKPIDTLVKVLNKQKLFMAKLEELKLVLEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGGAPQPGIIYDHIAALQGPISRFYQALQHGLGISNSLYQQLQKKNQLSYQLPDTLLKPE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHCHH
HVIRDMNFHPESQRLFKTTLERNKIENLEERAAAKRLGHFFNH
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA