Click here to switch to the map view.

The map label for this gene is 54294948

Identifier: 54294948

GI number: 54294948

Start: 2270643

End: 2270942

Strand: Direct

Name: 54294948

Synonym: lpl2027

Alternate gene names: NA

Gene position: 2270643-2270942 (Clockwise)

Preceding gene: 54294947

Following gene: 54294950

Centisome position: 67.87

GC content: 40.33

Gene sequence:

>300_bases
ATGGAGCGTTTTATCTTTAAAGGGACCTCTTTAATAAAACTGATGCTAGCTTTTACCCTTCTGATTGGAGCTTTGTTTTT
AGTCACCCCTGTAAATGCCAAAGCAGTTAACCGAGATATCAATCCGATAATTAATAAAGCCAATCCGACTCAAATGGCTT
ACTGGGTACGCTATAGGTATTGGGGGCCTCGTTACTATAGAGGGTACTATTACAGGCCATATTATTATCGTTGGGGTTAC
CCTTATTACAGACCTTACTACAGGCCCTACTACAGACCTTATTACTATTATCGCTGGTAG

Upstream 100 bases:

>100_bases
TAAAATTTAAACTCATACCCAGTAACAACTTTGTACAAAAATAAATCAAATAGTCCCGTGTAGTCTATACTTAAATAAAG
TACGCTTTAAGGAGTAAAAA

Downstream 100 bases:

>100_bases
GTGATAAGACGCTGCTGGCCTAAGTATAGAATATAGTGATGGTGATATAGCCTAAGAGGGCTTTGCCAAGAAGAGGATAT
TATACTTATAGCACAGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MERFIFKGTSLIKLMLAFTLLIGALFLVTPVNAKAVNRDINPIINKANPTQMAYWVRYRYWGPRYYRGYYYRPYYYRWGY
PYYRPYYRPYYRPYYYYRW

Sequences:

>Translated_99_residues
MERFIFKGTSLIKLMLAFTLLIGALFLVTPVNAKAVNRDINPIINKANPTQMAYWVRYRYWGPRYYRGYYYRPYYYRWGY
PYYRPYYRPYYRPYYYYRW
>Mature_99_residues
MERFIFKGTSLIKLMLAFTLLIGALFLVTPVNAKAVNRDINPIINKANPTQMAYWVRYRYWGPRYYRGYYYRPYYYRWGY
PYYRPYYRPYYRPYYYYRW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12610; Mature: 12610

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERFIFKGTSLIKLMLAFTLLIGALFLVTPVNAKAVNRDINPIINKANPTQMAYWVRYRY
CCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHCCCCCCCCEEEEEEEEE
WGPRYYRGYYYRPYYYRWGYPYYRPYYRPYYRPYYYYRW
CCCCCCCCEEECCEEEECCCCCCCCCCCCCCCEEEEEEC
>Mature Secondary Structure
MERFIFKGTSLIKLMLAFTLLIGALFLVTPVNAKAVNRDINPIINKANPTQMAYWVRYRY
CCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHCCCCCCCCEEEEEEEEE
WGPRYYRGYYYRPYYYRWGYPYYRPYYRPYYRPYYYYRW
CCCCCCCCEEECCEEEECCCCCCCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA