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The map label for this gene is vacJ [C]

Identifier: 54294733

GI number: 54294733

Start: 2025937

End: 2026719

Strand: Direct

Name: vacJ [C]

Synonym: lpl1810

Alternate gene names: 54294733

Gene position: 2025937-2026719 (Clockwise)

Preceding gene: 54294732

Following gene: 54294736

Centisome position: 60.55

GC content: 41.89

Gene sequence:

>783_bases
ATGCGACTAATCTTAATGTTTGCTAGCATCCTGGGCTCCGTTATTTTGGCAAGCTGTGCAAGTAAAGGATCAAACCCGAT
CGATCCATTTGAACCCTTTAATCGTAAAGTGCACAATTTTAATATGGCATTTGATGCTACCGTATTAAGACCACCAGCAA
AATTATATCAGGCTGTCGTACCAAAATTGGTAAGAAAAGGTGTGAATAATGCATTCAATAATCTGGATTTGTTCCCGACA
ATAGCCAGCGATATCCTGCAAGCTGAAGGAAAATGGGTAATCAAAGACAGTTGGCGACTCTTCATTAACTCCACTATTGG
GGTTGCTGGTCTGTTTGATGTAGCAGAAAAATTTGGTTTGCCACCGCATTACAATGATCTGGGCCTAACACTCGCCAAAT
GGGGCGATAAAAAATCTCCTTACCTTGTAATACCCTTTTTAGGCCCCAGTACTCTTCGTGATGGAGCTGGCTGGCTGTTC
CAGTTTGCACTCTGGAGTCCATATGTATATATTGATGATGCTGGTCTGGCTTATGGTTTAATTGGATTGCGCTACATTGA
TTTACGAACACAATTATTCGACTCTGAGCCTTTGCTGAATGAAGCGTTAGACAAATACACATTCATCCGAGACGCTTACC
TGCAACATAGAAATTATCTTATTGCAGGGACTGAGCAAGACACAGGCGCGTCCTTCGTTGAGGATGCGAAAGCTAACAAA
ACCGCAATGCAAGAATCAAGCGCTTCAAATAACCAACTAGGTTCTGACTATGTTGATGAATAA

Upstream 100 bases:

>100_bases
GCAGCAATTTGAAAGGTCTATTCTTTACATCAAAGCATTTGTTTGCAAGAACCAAAAACTGGTGTAACATCATTTTAAGT
ATTTAATAAATAGAATAATT

Downstream 100 bases:

>100_bases
ACTGTTTAATTGAGACTTGCCAGGTCATAATAAGGGTTGGCGTTAAGCCAAATGCAAAGCCAACTCTCTTTAAGCTCTGA
ACTTCAAAATCAAAATAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MRLILMFASILGSVILASCASKGSNPIDPFEPFNRKVHNFNMAFDATVLRPPAKLYQAVVPKLVRKGVNNAFNNLDLFPT
IASDILQAEGKWVIKDSWRLFINSTIGVAGLFDVAEKFGLPPHYNDLGLTLAKWGDKKSPYLVIPFLGPSTLRDGAGWLF
QFALWSPYVYIDDAGLAYGLIGLRYIDLRTQLFDSEPLLNEALDKYTFIRDAYLQHRNYLIAGTEQDTGASFVEDAKANK
TAMQESSASNNQLGSDYVDE

Sequences:

>Translated_260_residues
MRLILMFASILGSVILASCASKGSNPIDPFEPFNRKVHNFNMAFDATVLRPPAKLYQAVVPKLVRKGVNNAFNNLDLFPT
IASDILQAEGKWVIKDSWRLFINSTIGVAGLFDVAEKFGLPPHYNDLGLTLAKWGDKKSPYLVIPFLGPSTLRDGAGWLF
QFALWSPYVYIDDAGLAYGLIGLRYIDLRTQLFDSEPLLNEALDKYTFIRDAYLQHRNYLIAGTEQDTGASFVEDAKANK
TAMQESSASNNQLGSDYVDE
>Mature_260_residues
MRLILMFASILGSVILASCASKGSNPIDPFEPFNRKVHNFNMAFDATVLRPPAKLYQAVVPKLVRKGVNNAFNNLDLFPT
IASDILQAEGKWVIKDSWRLFINSTIGVAGLFDVAEKFGLPPHYNDLGLTLAKWGDKKSPYLVIPFLGPSTLRDGAGWLF
QFALWSPYVYIDDAGLAYGLIGLRYIDLRTQLFDSEPLLNEALDKYTFIRDAYLQHRNYLIAGTEQDTGASFVEDAKANK
TAMQESSASNNQLGSDYVDE

Specific function: Unknown

COG id: COG2853

COG function: function code M; Surface lipoprotein

Gene ontology:

Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaA family [H]

Homologues:

Organism=Escherichia coli, GI1788688, Length=227, Percent_Identity=32.15859030837, Blast_Score=105, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007428 [H]

Pfam domain/function: PF04333 VacJ [H]

EC number: NA

Molecular weight: Translated: 28941; Mature: 28941

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLILMFASILGSVILASCASKGSNPIDPFEPFNRKVHNFNMAFDATVLRPPAKLYQAVV
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCEEECCEEECCHHHHHHHHH
PKLVRKGVNNAFNNLDLFPTIASDILQAEGKWVIKDSWRLFINSTIGVAGLFDVAEKFGL
HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCEEEEEECCCCHHHHHHHHHHCCC
PPHYNDLGLTLAKWGDKKSPYLVIPFLGPSTLRDGAGWLFQFALWSPYVYIDDAGLAYGL
CCCCCCCCCCHHHCCCCCCCEEEEEECCCHHHCCCHHHHHHHHHHCCEEEEECCCHHHHH
IGLRYIDLRTQLFDSEPLLNEALDKYTFIRDAYLQHRNYLIAGTEQDTGASFVEDAKANK
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHH
TAMQESSASNNQLGSDYVDE
HHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRLILMFASILGSVILASCASKGSNPIDPFEPFNRKVHNFNMAFDATVLRPPAKLYQAVV
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCEEECCEEECCHHHHHHHHH
PKLVRKGVNNAFNNLDLFPTIASDILQAEGKWVIKDSWRLFINSTIGVAGLFDVAEKFGL
HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCEEEEEECCCCHHHHHHHHHHCCC
PPHYNDLGLTLAKWGDKKSPYLVIPFLGPSTLRDGAGWLFQFALWSPYVYIDDAGLAYGL
CCCCCCCCCCHHHCCCCCCCEEEEEECCCHHHCCCHHHHHHHHHHCCEEEEECCCHHHHH
IGLRYIDLRTQLFDSEPLLNEALDKYTFIRDAYLQHRNYLIAGTEQDTGASFVEDAKANK
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHH
TAMQESSASNNQLGSDYVDE
HHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA