| Definition | Legionella pneumophila str. Lens, complete genome. |
|---|---|
| Accession | NC_006369 |
| Length | 3,345,687 |
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The map label for this gene is iolCB [H]
Identifier: 54294541
GI number: 54294541
Start: 1789863
End: 1791749
Strand: Reverse
Name: iolCB [H]
Synonym: lpl1617
Alternate gene names: 54294541
Gene position: 1791749-1789863 (Counterclockwise)
Preceding gene: 54294542
Following gene: 54294540
Centisome position: 53.55
GC content: 38.53
Gene sequence:
>1887_bases ATGAAACAGTTTCCCGGATTTTATTTTGATAGGAATAGAGCAATCGATTTGATTTGTATGGGACGCGTAGCAGTTGATCT CTACGCGGAGCAAATAGGATTGGATTTGAAGGATGTTGCAAGCTTTAAAAAATATTTGGGTGGTTGTGCAGGAAATATTG CTGTTGGAGCTGCCCGATTAGGATTAAAAAGCCAGATGTTTTCCTGTGTTGGCTCAGATGAGTTAGGTAAGTTTCTGAAA GAAGAACTGGAACGTGAGGGAGTTAATATTGAGTTATTATCGGAAACAGATAATCATTTAACTGGCCTTGTACTTTTGGG TATTAAGCCTCCCTCCAATTTCCCTCTGCTTTTTTATCGTAATGATTGCGCAGATATGCAGATTAAATCGGATCAAATTA GTTTTACTCATTTAAAAAATGCAAAGGCATTATTGATAACGGGCACTGGTTTATCCACAGAATCAATGAAAAATACTACC TTGGAAGTAGTCCATTTAGCCCGAAAAGCAGAAACGACAATAGTTTTTGATCTCGATTATAGACCGGTCCTTTGGAGGTT AACTGTGATTGGTAATGGAGAAAGTCGTTATTGCCAGAATGAATATGTAACTCAAGTGTATCAACAAGTTTTGCCTTTAT GCGATTTGATTGTTGGGACTGAAGAGGAAATATGTATTGCAGGCGGTTCGAATGATATTGAAGTTTCATTAATCAATATC AGGCAGCGAACTGATGTGCCAATAGTTGTTAAATTAGGAGAGAAGGGTGCCCATGTGCATTTTGGGGCAGACAAAGGTCT ATTACAGGCAAAATCTTTTCCTGTTGAAGTATTGAATGTTTTGGGAGCAGGTGATGGTTTTATGTCCGGGCTTTTAGCTG GTTTGCTGCAAGGAAAATCATGGGAGCGAGCCGTAACCTATGCTAATGCTTGTGGCGCCTTGGTCGTGACCCGTCATGGT TGCGCTCCTGCAATTCCATACAAGGAAGAATTGAACTATTTTATTCAAGAATATGATCATGATCCTGAAATATGGAGCAG TTCTCAGTTAACACAACTGCATGAGGAATTAAGTAAAAATCAAAAGACACAGTTGCTTATTAAAAATCCATGTGGATTTG CCGATGGTTTAAATTCGATTGTAACGATGCAGGACTCACCTACAGCAATGAGTTTTAGCTCTCTTAAATTAAATAAGGGG CAAAGCCATCAATTTAACTCAAGTTATGAATTTGCAGCCCTCTTAATGACAGGAAAAGTTGCTTTCCAGTATGGTTCTTA TAGCCAGGAGGTTGAACGTACAGATTATTTTTCTCAATCACCCTATGTCTTGCACTGCTCAAAGAATGAAGTAAGTTCAG TAATCGCTCTGACTGATTGTGAAATTTTATTAATGGAAACGGAAAACGAAAATTTATTTTCTCCGATTTTATTTGATGCA TCTAATATGCTTGAGTTAGACAATAGGGGAGAAGGAGTTCTTGAAAATACTTCATATCGGCTTGTCAGAACGGTATTTGA TAAACGAAACAGACCCGAATCTAATTTGGTAGTTGGGGAAATTATTACGTTTCAAGGGCGTTGGTCAAGTTATCCTTCAC ATTATCATCAACAACCTGAAATTTACCATTACAGGTTTTCAGAGCCTCAAGGCTATGCTTTTGGTGAAAATGGTAAAGAG GTGATGCGAATTGAACACTATGATACCTACCAGATTGCCAATAATCAGGAACATGCTCATTGTACAGCGCCCGGTTATGC ACTTTATACACTGTGGTTTATCCGGCATTTAAATAATAACGCATATACCTTGCCTACCTTCACAAAAGACCATGAATGGA CAAGGACAAGCAGGGCAAATTTAAGAGCATGGCAACAGAAACAGTAA
Upstream 100 bases:
>100_bases CCCGTTTCAGGATTGGATGGACTACAAGCCTTGCGCATCGCAAAAGCTGCGAAACAATCTTTAGAAACGCATCTCCCAGT AGTATTGAGTTGAGGACGTT
Downstream 100 bases:
>100_bases CAATCCTTATCTGCAGTATGATTTTGAGAGTTAAATAAATGAAGATTAAATTAACTATGGCTCAGGCCCTATTAAGATTT TTAGCTAATCAGTATGTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: 2-deoxy-5-keto-D-gluconate kinase; DKG kinase [H]
Number of amino acids: Translated: 628; Mature: 628
Protein sequence:
>628_residues MKQFPGFYFDRNRAIDLICMGRVAVDLYAEQIGLDLKDVASFKKYLGGCAGNIAVGAARLGLKSQMFSCVGSDELGKFLK EELEREGVNIELLSETDNHLTGLVLLGIKPPSNFPLLFYRNDCADMQIKSDQISFTHLKNAKALLITGTGLSTESMKNTT LEVVHLARKAETTIVFDLDYRPVLWRLTVIGNGESRYCQNEYVTQVYQQVLPLCDLIVGTEEEICIAGGSNDIEVSLINI RQRTDVPIVVKLGEKGAHVHFGADKGLLQAKSFPVEVLNVLGAGDGFMSGLLAGLLQGKSWERAVTYANACGALVVTRHG CAPAIPYKEELNYFIQEYDHDPEIWSSSQLTQLHEELSKNQKTQLLIKNPCGFADGLNSIVTMQDSPTAMSFSSLKLNKG QSHQFNSSYEFAALLMTGKVAFQYGSYSQEVERTDYFSQSPYVLHCSKNEVSSVIALTDCEILLMETENENLFSPILFDA SNMLELDNRGEGVLENTSYRLVRTVFDKRNRPESNLVVGEIITFQGRWSSYPSHYHQQPEIYHYRFSEPQGYAFGENGKE VMRIEHYDTYQIANNQEHAHCTAPGYALYTLWFIRHLNNNAYTLPTFTKDHEWTRTSRANLRAWQQKQ
Sequences:
>Translated_628_residues MKQFPGFYFDRNRAIDLICMGRVAVDLYAEQIGLDLKDVASFKKYLGGCAGNIAVGAARLGLKSQMFSCVGSDELGKFLK EELEREGVNIELLSETDNHLTGLVLLGIKPPSNFPLLFYRNDCADMQIKSDQISFTHLKNAKALLITGTGLSTESMKNTT LEVVHLARKAETTIVFDLDYRPVLWRLTVIGNGESRYCQNEYVTQVYQQVLPLCDLIVGTEEEICIAGGSNDIEVSLINI RQRTDVPIVVKLGEKGAHVHFGADKGLLQAKSFPVEVLNVLGAGDGFMSGLLAGLLQGKSWERAVTYANACGALVVTRHG CAPAIPYKEELNYFIQEYDHDPEIWSSSQLTQLHEELSKNQKTQLLIKNPCGFADGLNSIVTMQDSPTAMSFSSLKLNKG QSHQFNSSYEFAALLMTGKVAFQYGSYSQEVERTDYFSQSPYVLHCSKNEVSSVIALTDCEILLMETENENLFSPILFDA SNMLELDNRGEGVLENTSYRLVRTVFDKRNRPESNLVVGEIITFQGRWSSYPSHYHQQPEIYHYRFSEPQGYAFGENGKE VMRIEHYDTYQIANNQEHAHCTAPGYALYTLWFIRHLNNNAYTLPTFTKDHEWTRTSRANLRAWQQKQ >Mature_628_residues MKQFPGFYFDRNRAIDLICMGRVAVDLYAEQIGLDLKDVASFKKYLGGCAGNIAVGAARLGLKSQMFSCVGSDELGKFLK EELEREGVNIELLSETDNHLTGLVLLGIKPPSNFPLLFYRNDCADMQIKSDQISFTHLKNAKALLITGTGLSTESMKNTT LEVVHLARKAETTIVFDLDYRPVLWRLTVIGNGESRYCQNEYVTQVYQQVLPLCDLIVGTEEEICIAGGSNDIEVSLINI RQRTDVPIVVKLGEKGAHVHFGADKGLLQAKSFPVEVLNVLGAGDGFMSGLLAGLLQGKSWERAVTYANACGALVVTRHG CAPAIPYKEELNYFIQEYDHDPEIWSSSQLTQLHEELSKNQKTQLLIKNPCGFADGLNSIVTMQDSPTAMSFSSLKLNKG QSHQFNSSYEFAALLMTGKVAFQYGSYSQEVERTDYFSQSPYVLHCSKNEVSSVIALTDCEILLMETENENLFSPILFDA SNMLELDNRGEGVLENTSYRLVRTVFDKRNRPESNLVVGEIITFQGRWSSYPSHYHQQPEIYHYRFSEPQGYAFGENGKE VMRIEHYDTYQIANNQEHAHCTAPGYALYTLWFIRHLNNNAYTLPTFTKDHEWTRTSRANLRAWQQKQ
Specific function: Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5- dehydro-2-deoxy-D-gluconate (DKGP) [H]
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Escherichia coli, GI87082281, Length=294, Percent_Identity=25.1700680272109, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1790193, Length=299, Percent_Identity=21.7391304347826, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR022841 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.92 [H]
Molecular weight: Translated: 70716; Mature: 70716
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQFPGFYFDRNRAIDLICMGRVAVDLYAEQIGLDLKDVASFKKYLGGCAGNIAVGAARL CCCCCCCEECCCCEEEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHH GLKSQMFSCVGSDELGKFLKEELEREGVNIELLSETDNHLTGLVLLGIKPPSNFPLLFYR CHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEEEECCCCCCCEEEEE NDCADMQIKSDQISFTHLKNAKALLITGTGLSTESMKNTTLEVVHLARKAETTIVFDLDY CCCCCCEEECCCEEEEEECCCCEEEEEECCCCCCHHCCHHHHHHHHHHHCCEEEEEEECC RPVLWRLTVIGNGESRYCQNEYVTQVYQQVLPLCDLIVGTEEEICIAGGSNDIEVSLINI CCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEEE RQRTDVPIVVKLGEKGAHVHFGADKGLLQAKSFPVEVLNVLGAGDGFMSGLLAGLLQGKS ECCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCC WERAVTYANACGALVVTRHGCAPAIPYKEELNYFIQEYDHDPEIWSSSQLTQLHEELSKN HHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC QKTQLLIKNPCGFADGLNSIVTMQDSPTAMSFSSLKLNKGQSHQFNSSYEFAALLMTGKV CCEEEEEECCCCCCCCCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEECEE AFQYGSYSQEVERTDYFSQSPYVLHCSKNEVSSVIALTDCEILLMETENENLFSPILFDA EEEECCCHHHHHHHHCCCCCCEEEEECCCCCCEEEEEECCEEEEEECCCCCCCCHHEECC SNMLELDNRGEGVLENTSYRLVRTVFDKRNRPESNLVVGEIITFQGRWSSYPSHYHQQPE CCEEEECCCCCCCEECCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCHHHCCCCC IYHYRFSEPQGYAFGENGKEVMRIEHYDTYQIANNQEHAHCTAPGYALYTLWFIRHLNNN EEEEEECCCCCCEECCCCCEEEEEECCCEEEECCCCCCEEECCCCHHHHHHHHHHHHCCC AYTLPTFTKDHEWTRTSRANLRAWQQKQ EEECCCCCCCCCCCCCCCCHHHHHCCCC >Mature Secondary Structure MKQFPGFYFDRNRAIDLICMGRVAVDLYAEQIGLDLKDVASFKKYLGGCAGNIAVGAARL CCCCCCCEECCCCEEEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHH GLKSQMFSCVGSDELGKFLKEELEREGVNIELLSETDNHLTGLVLLGIKPPSNFPLLFYR CHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEEEECCCCCCCEEEEE NDCADMQIKSDQISFTHLKNAKALLITGTGLSTESMKNTTLEVVHLARKAETTIVFDLDY CCCCCCEEECCCEEEEEECCCCEEEEEECCCCCCHHCCHHHHHHHHHHHCCEEEEEEECC RPVLWRLTVIGNGESRYCQNEYVTQVYQQVLPLCDLIVGTEEEICIAGGSNDIEVSLINI CCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEEE RQRTDVPIVVKLGEKGAHVHFGADKGLLQAKSFPVEVLNVLGAGDGFMSGLLAGLLQGKS ECCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCC WERAVTYANACGALVVTRHGCAPAIPYKEELNYFIQEYDHDPEIWSSSQLTQLHEELSKN HHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC QKTQLLIKNPCGFADGLNSIVTMQDSPTAMSFSSLKLNKGQSHQFNSSYEFAALLMTGKV CCEEEEEECCCCCCCCCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEECEE AFQYGSYSQEVERTDYFSQSPYVLHCSKNEVSSVIALTDCEILLMETENENLFSPILFDA EEEECCCHHHHHHHHCCCCCCEEEEECCCCCCEEEEEECCEEEEEECCCCCCCCHHEECC SNMLELDNRGEGVLENTSYRLVRTVFDKRNRPESNLVVGEIITFQGRWSSYPSHYHQQPE CCEEEECCCCCCCEECCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCHHHCCCCC IYHYRFSEPQGYAFGENGKEVMRIEHYDTYQIANNQEHAHCTAPGYALYTLWFIRHLNNN EEEEEECCCCCCEECCCCCEEEEEECCCEEEECCCCCCEEECCCCHHHHHHHHHHHHCCC AYTLPTFTKDHEWTRTSRANLRAWQQKQ EEECCCCCCCCCCCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12552129 [H]