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The map label for this gene is ybcL [C]

Identifier: 54294517

GI number: 54294517

Start: 1769255

End: 1769704

Strand: Direct

Name: ybcL [C]

Synonym: lpl1593

Alternate gene names: 54294517

Gene position: 1769255-1769704 (Clockwise)

Preceding gene: 54294514

Following gene: 54294524

Centisome position: 52.88

GC content: 40.67

Gene sequence:

>450_bases
TTGAGTTTATTGCTAACAAGCCCGGCATTTGAACATAACGATTTTATTCCTGATGAATTTACTTGCCATGGATTGGATCG
CCCTCCACCGCTTGAGTGGGAAAACGCCCCGCCAAATACCCAATCCTATGTATTAATTATGGATGATCCAGATGCGTCAG
GAGGATTATGGGTTCACTGGGTTTTATTCAACATACCGGCAAGTTATAACGAACTGGATGCAGCTATAGATGTACCCGAC
TCAGCGATAAGCGTTAAGAATAGTTGGGGCAAAACAGGTTACGGCGGACCATGTCCACCAAGCGGAACACATCGATATTA
TTTTAGGTTATATGCTTTGGATACTTTTTTATCTCTGGATGAAAAAGCAACAAAGAAAGACGTTGAATATGCTATGCAAG
GCCATATTCTTGAGACAAGTGAGCTCATTTGTAAATATACTAAAATCTAA

Upstream 100 bases:

>100_bases
ATCCAAAATTACCATGCTAATATAATTTATGTGTAGTAAGGAAAAATAACAAAAGACTAAGATTCACAATGCTGTATCCG
AGAGAGACAAGGAGAGTATT

Downstream 100 bases:

>100_bases
TCCCTCTTGGGATTAGAAGAGAACAATGATACCTAATATACACATAACCCTATTTTTTGGGGAACAAAAAATATACCAGC
CAAGTTAAATTGTCGTTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MSLLLTSPAFEHNDFIPDEFTCHGLDRPPPLEWENAPPNTQSYVLIMDDPDASGGLWVHWVLFNIPASYNELDAAIDVPD
SAISVKNSWGKTGYGGPCPPSGTHRYYFRLYALDTFLSLDEKATKKDVEYAMQGHILETSELICKYTKI

Sequences:

>Translated_149_residues
MSLLLTSPAFEHNDFIPDEFTCHGLDRPPPLEWENAPPNTQSYVLIMDDPDASGGLWVHWVLFNIPASYNELDAAIDVPD
SAISVKNSWGKTGYGGPCPPSGTHRYYFRLYALDTFLSLDEKATKKDVEYAMQGHILETSELICKYTKI
>Mature_148_residues
SLLLTSPAFEHNDFIPDEFTCHGLDRPPPLEWENAPPNTQSYVLIMDDPDASGGLWVHWVLFNIPASYNELDAAIDVPDS
AISVKNSWGKTGYGGPCPPSGTHRYYFRLYALDTFLSLDEKATKKDVEYAMQGHILETSELICKYTKI

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=137, Percent_Identity=34.3065693430657, Blast_Score=84, Evalue=3e-18,
Organism=Escherichia coli, GI1786990, Length=158, Percent_Identity=31.6455696202532, Blast_Score=84, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 16742; Mature: 16611

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLLTSPAFEHNDFIPDEFTCHGLDRPPPLEWENAPPNTQSYVLIMDDPDASGGLWVHW
CCEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEE
VLFNIPASYNELDAAIDVPDSAISVKNSWGKTGYGGPCPPSGTHRYYFRLYALDTFLSLD
EEEECCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHCC
EKATKKDVEYAMQGHILETSELICKYTKI
CHHHHHHHHHHHHCCEECHHHHHEEECCC
>Mature Secondary Structure 
SLLLTSPAFEHNDFIPDEFTCHGLDRPPPLEWENAPPNTQSYVLIMDDPDASGGLWVHW
CEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEE
VLFNIPASYNELDAAIDVPDSAISVKNSWGKTGYGGPCPPSGTHRYYFRLYALDTFLSLD
EEEECCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHCC
EKATKKDVEYAMQGHILETSELICKYTKI
CHHHHHHHHHHHHCCEECHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]