| Definition | Legionella pneumophila str. Lens, complete genome. |
|---|---|
| Accession | NC_006369 |
| Length | 3,345,687 |
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The map label for this gene is ybeZ [H]
Identifier: 54294524
GI number: 54294524
Start: 1775180
End: 1776130
Strand: Direct
Name: ybeZ [H]
Synonym: lpl1600
Alternate gene names: 54294524
Gene position: 1775180-1776130 (Clockwise)
Preceding gene: 54294517
Following gene: 54294525
Centisome position: 53.06
GC content: 37.22
Gene sequence:
>951_bases TTGAGTAGTACATTAAACAGTGAAATAATCAAATTACCACCTCTTAATACCAGGGAACTCGCAAACCTGTGTGGGGTTTT GCACAGTAACTTAAAAATTTTAGAACAGCACTTCAAGGTTTCAATAAAGATCAAAAATCATAGCATGATAATATGTGGCC AATCATGTGACCATTTTGAAGAGATAAAAAAAGTATTAAAATTATTGTATCCTTTAACTAGCGAACCTATAGATGCCAAA ACTCTACGAGTCTTAATCAATGAGGATTATCAAACAGCAATGACTCACCATATCAGATTATCTCGAAAATCAATTTCTGC ACGTAACAGTAAACAAGCCGCATATCTGGATTCTATTAATACGCATGATATTACATTTGCTGTAGGGCCGGCTGGGACTG GTAAAACCTACCTGGCTGTTTCCAAAGCAATAGAATGTTTTGAAAAAGGCGAAGTACAAAGACTTATTTTTGTAAGGCCT GCTGTAGAAGCGGGTGAAAAGCTCGGTTTTCTTCCCGGCGATCTGGTAGAAAAAGTCTTACCTTACTTAAGGCCTATCTA TGACGCACTGTATGAAATGATAGGCTTTAAAGAAACTCAAAAACTGATTCAAACAGATATCATTGAAATTCTCCCATTAG CTTTCATGAGGGGCAGAACTTTAAATGAATCTTTTATTATTCTGGATGAGGCTCAAAACACCACTATCATGCAAATGAAA ATGTTTTTGACACGCATGGGCTTTGGCTCTAAAACAGTCATCACAGGTGATATCACTCAAGTCGACTTGCCTAAAGGCAT TGACTCGGGCCTTGCGCATGCCATTCAACTATTCAGACATTTTCCTGATATCAGCATTCATACATTTACCAGTCGTGAGG TCGTCAGACATCCTTTGGTTTCAAAAATCGTAGATTGCTATGATAATGAGATGGAAAGGATTAAAAAATGA
Upstream 100 bases:
>100_bases ATGTTGTAAAGACTAAACTATCCTTTTCTTTGAACAACTTGCACAACATAGTACTTTTGCACTATTCTTTAAGTAAGGTC ATTAATCTTTAATAAAAACT
Downstream 100 bases:
>100_bases CCTATCACATTGACATACAAAATGCTACAGGGAAATTATTGCCTTTGAGTGAAGATGAAATCACCAAGCTGGCATCACTA GCTCTAAGAGATCATAAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MSSTLNSEIIKLPPLNTRELANLCGVLHSNLKILEQHFKVSIKIKNHSMIICGQSCDHFEEIKKVLKLLYPLTSEPIDAK TLRVLINEDYQTAMTHHIRLSRKSISARNSKQAAYLDSINTHDITFAVGPAGTGKTYLAVSKAIECFEKGEVQRLIFVRP AVEAGEKLGFLPGDLVEKVLPYLRPIYDALYEMIGFKETQKLIQTDIIEILPLAFMRGRTLNESFIILDEAQNTTIMQMK MFLTRMGFGSKTVITGDITQVDLPKGIDSGLAHAIQLFRHFPDISIHTFTSREVVRHPLVSKIVDCYDNEMERIKK
Sequences:
>Translated_316_residues MSSTLNSEIIKLPPLNTRELANLCGVLHSNLKILEQHFKVSIKIKNHSMIICGQSCDHFEEIKKVLKLLYPLTSEPIDAK TLRVLINEDYQTAMTHHIRLSRKSISARNSKQAAYLDSINTHDITFAVGPAGTGKTYLAVSKAIECFEKGEVQRLIFVRP AVEAGEKLGFLPGDLVEKVLPYLRPIYDALYEMIGFKETQKLIQTDIIEILPLAFMRGRTLNESFIILDEAQNTTIMQMK MFLTRMGFGSKTVITGDITQVDLPKGIDSGLAHAIQLFRHFPDISIHTFTSREVVRHPLVSKIVDCYDNEMERIKK >Mature_315_residues SSTLNSEIIKLPPLNTRELANLCGVLHSNLKILEQHFKVSIKIKNHSMIICGQSCDHFEEIKKVLKLLYPLTSEPIDAKT LRVLINEDYQTAMTHHIRLSRKSISARNSKQAAYLDSINTHDITFAVGPAGTGKTYLAVSKAIECFEKGEVQRLIFVRPA VEAGEKLGFLPGDLVEKVLPYLRPIYDALYEMIGFKETQKLIQTDIIEILPLAFMRGRTLNESFIILDEAQNTTIMQMKM FLTRMGFGSKTVITGDITQVDLPKGIDSGLAHAIQLFRHFPDISIHTFTSREVVRHPLVSKIVDCYDNEMERIKK
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=334, Percent_Identity=46.4071856287425, Blast_Score=286, Evalue=1e-78, Organism=Escherichia coli, GI1787257, Length=205, Percent_Identity=44.390243902439, Blast_Score=186, Evalue=1e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 35757; Mature: 35626
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTLNSEIIKLPPLNTRELANLCGVLHSNLKILEQHFKVSIKIKNHSMIICGQSCDHFE CCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCEEEEECCCCHHHH EIKKVLKLLYPLTSEPIDAKTLRVLINEDYQTAMTHHIRLSRKSISARNSKQAAYLDSIN HHHHHHHHHHCCCCCCCCHHHHHEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCC THDITFAVGPAGTGKTYLAVSKAIECFEKGEVQRLIFVRPAVEAGEKLGFLPGDLVEKVL CCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCCHHHHHHHH PYLRPIYDALYEMIGFKETQKLIQTDIIEILPLAFMRGRTLNESFIILDEAQNTTIMQMK HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHH MFLTRMGFGSKTVITGDITQVDLPKGIDSGLAHAIQLFRHFPDISIHTFTSREVVRHPLV HHHHHCCCCCCEEEECCCEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHH SKIVDCYDNEMERIKK HHHHHHHHHHHHHHCC >Mature Secondary Structure SSTLNSEIIKLPPLNTRELANLCGVLHSNLKILEQHFKVSIKIKNHSMIICGQSCDHFE CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCEEEEECCCCHHHH EIKKVLKLLYPLTSEPIDAKTLRVLINEDYQTAMTHHIRLSRKSISARNSKQAAYLDSIN HHHHHHHHHHCCCCCCCCHHHHHEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCC THDITFAVGPAGTGKTYLAVSKAIECFEKGEVQRLIFVRPAVEAGEKLGFLPGDLVEKVL CCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCCHHHHHHHH PYLRPIYDALYEMIGFKETQKLIQTDIIEILPLAFMRGRTLNESFIILDEAQNTTIMQMK HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHH MFLTRMGFGSKTVITGDITQVDLPKGIDSGLAHAIQLFRHFPDISIHTFTSREVVRHPLV HHHHHCCCCCCEEEECCCEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHH SKIVDCYDNEMERIKK HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]