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The map label for this gene is 54294494

Identifier: 54294494

GI number: 54294494

Start: 1741116

End: 1741934

Strand: Reverse

Name: 54294494

Synonym: lpl1563

Alternate gene names: NA

Gene position: 1741934-1741116 (Counterclockwise)

Preceding gene: 54294495

Following gene: 54294489

Centisome position: 52.07

GC content: 34.31

Gene sequence:

>819_bases
ATGATTACTAAGCAAAATGGAATTTATACTCTAATTATTACCTTATTATTTTTATCATTTCAAATCAAAGCTGCCACTGA
TTATCAAACATATGAAACCGTTTGTGGTGAACCAACGGATATGTTTTCATTTGTTGATAGGGGAGGAATTGCGATTAATC
CTTGTGTTGTTCCTCCAAGAAATGTATTGCTCGGTTTAGGATATCAATATCAACAATTAATTGGCGGAGGGATACAAAAT
AATTTTCCTTCTTCTGTAATAGAAGTAGGTTTTCCTGATTATTTCGAAGTAGATTTAACCTTACCCAGCTACATCAATCA
AACTGTTGCGCCACGCATAGGTTATAGTGCAACCCAGTTGGATTTCAAACGTATTTTATGGTTTAACAGTAAATGGATTG
CTTCTGTTAATGGTACAGTAATATTTCCTTCAGGTAGTTCTTCTTTTGGCAGTAAGGGACCTGGAGGAGGAGTAACAGGA
ATTCTTGCTTATAATATTAATGACCAGCTCAATTTGACAGGAACTTTGGAGTATATTTCTATCTCGGAACCTATTAACAG
TGGTGGACAAAGTTATACCAGCGTTAATCCAGATCTTCTTTTATCATGGACTAAAAATAAAATATCATTATTTGCTGAAG
TGTATGGCCAAAGCAAAACAGCACCCGATGAAAGAAGCGGTTATAATGCAGATGCAGGTATTCTTTATTTAATTAAAAAA
AATATTGTCATCGATTTGGAGATTGATCAACGTATTAGTGGTCTTTTGGATGGTGTTGAGCGTTATTATGGCGGAGGAAT
TACTATACAATTTAATTAA

Upstream 100 bases:

>100_bases
CAAGGTATGTTCACATAGACTAGAGATTGCAAAGATAGTAGTCTTTTGTAAATGATTAGATTTTGTATTTCAGTTAATTG
TTAATCAATTGGACAGAAAA

Downstream 100 bases:

>100_bases
TGCGGACTCACTTTAACGCAAAGCCAGCATAGTGCCAGGGCGTCTATATTTGGCAAAATGCAATTTCCATTTCTATTGTT
TTATCTCTGATTTCTTGACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MITKQNGIYTLIITLLFLSFQIKAATDYQTYETVCGEPTDMFSFVDRGGIAINPCVVPPRNVLLGLGYQYQQLIGGGIQN
NFPSSVIEVGFPDYFEVDLTLPSYINQTVAPRIGYSATQLDFKRILWFNSKWIASVNGTVIFPSGSSSFGSKGPGGGVTG
ILAYNINDQLNLTGTLEYISISEPINSGGQSYTSVNPDLLLSWTKNKISLFAEVYGQSKTAPDERSGYNADAGILYLIKK
NIVIDLEIDQRISGLLDGVERYYGGGITIQFN

Sequences:

>Translated_272_residues
MITKQNGIYTLIITLLFLSFQIKAATDYQTYETVCGEPTDMFSFVDRGGIAINPCVVPPRNVLLGLGYQYQQLIGGGIQN
NFPSSVIEVGFPDYFEVDLTLPSYINQTVAPRIGYSATQLDFKRILWFNSKWIASVNGTVIFPSGSSSFGSKGPGGGVTG
ILAYNINDQLNLTGTLEYISISEPINSGGQSYTSVNPDLLLSWTKNKISLFAEVYGQSKTAPDERSGYNADAGILYLIKK
NIVIDLEIDQRISGLLDGVERYYGGGITIQFN
>Mature_272_residues
MITKQNGIYTLIITLLFLSFQIKAATDYQTYETVCGEPTDMFSFVDRGGIAINPCVVPPRNVLLGLGYQYQQLIGGGIQN
NFPSSVIEVGFPDYFEVDLTLPSYINQTVAPRIGYSATQLDFKRILWFNSKWIASVNGTVIFPSGSSSFGSKGPGGGVTG
ILAYNINDQLNLTGTLEYISISEPINSGGQSYTSVNPDLLLSWTKNKISLFAEVYGQSKTAPDERSGYNADAGILYLIKK
NIVIDLEIDQRISGLLDGVERYYGGGITIQFN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29741; Mature: 29741

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITKQNGIYTLIITLLFLSFQIKAATDYQTYETVCGEPTDMFSFVDRGGIAINPCVVPPR
CCCCCCCHHHHHHHHHHHHEEEEECCCCHHHHHHCCCHHHHHHHHHCCCEEECCCCCCCC
NVLLGLGYQYQQLIGGGIQNNFPSSVIEVGFPDYFEVDLTLPSYINQTVAPRIGYSATQL
HHEEECCCHHHHHHCCCCCCCCCCCEEECCCCCEEEEEEECHHHHCHHHCCCCCCCHHHH
DFKRILWFNSKWIASVNGTVIFPSGSSSFGSKGPGGGVTGILAYNINDQLNLTGTLEYIS
HHEEEEEECCEEEEECCCEEEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEEEE
ISEPINSGGQSYTSVNPDLLLSWTKNKISLFAEVYGQSKTAPDERSGYNADAGILYLIKK
ECCCCCCCCCEEECCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEC
NIVIDLEIDQRISGLLDGVERYYGGGITIQFN
CEEEEEEHHHHHHHHHHHHHHHHCCCEEEEEC
>Mature Secondary Structure
MITKQNGIYTLIITLLFLSFQIKAATDYQTYETVCGEPTDMFSFVDRGGIAINPCVVPPR
CCCCCCCHHHHHHHHHHHHEEEEECCCCHHHHHHCCCHHHHHHHHHCCCEEECCCCCCCC
NVLLGLGYQYQQLIGGGIQNNFPSSVIEVGFPDYFEVDLTLPSYINQTVAPRIGYSATQL
HHEEECCCHHHHHHCCCCCCCCCCCEEECCCCCEEEEEEECHHHHCHHHCCCCCCCHHHH
DFKRILWFNSKWIASVNGTVIFPSGSSSFGSKGPGGGVTGILAYNINDQLNLTGTLEYIS
HHEEEEEECCEEEEECCCEEEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEEEE
ISEPINSGGQSYTSVNPDLLLSWTKNKISLFAEVYGQSKTAPDERSGYNADAGILYLIKK
ECCCCCCCCCEEECCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEC
NIVIDLEIDQRISGLLDGVERYYGGGITIQFN
CEEEEEEHHHHHHHHHHHHHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA