Click here to switch to the map view.

The map label for this gene is 54294371

Identifier: 54294371

GI number: 54294371

Start: 1605583

End: 1606071

Strand: Reverse

Name: 54294371

Synonym: lpl1440

Alternate gene names: NA

Gene position: 1606071-1605583 (Counterclockwise)

Preceding gene: 54294372

Following gene: 54294370

Centisome position: 48.0

GC content: 34.76

Gene sequence:

>489_bases
ATGTCATTAATTAATTATTTTACTAAAACGCTGTTAATCACAGCTTTTGCGACCAATGCAGTCCAGGCTGCTTCGATTTT
TCCCCGTGGCTGTGAAGTCACTGGTTTTGGTTATAGTGAAAATTATTTAATTTTAAATGAAACAGGTAATCAAACCTATT
ATCTCATTCAAAACCGTTCAGATTCGAAAATTGAGCTTGAACGTTTTGATAACTCAGATGCGTTTATGATTCCTCCCTTA
CAAGCATCGCTAGATCCAATGAGTTGGGCAGCATTCGCTTCAGATGTAAAAAATTTAAACTTTAAGTGCTATAAGCATGT
TGATGAAAATACTGCTTTAGTTGATTGTCGAGATGTTCTCGAAGTCTGCCAATATCCCCGTGTTAAATTTGCACTTAGTA
ATATGGGAAACTATTGGATTTCTACTAATAAATCACAAAATGAAGTTATACAGGAATCGGTTGCTAAAGGAATTTACCTA
AAATGGTGA

Upstream 100 bases:

>100_bases
CGAATTAATAGCTTCTATGCGTTTGATTTTTTTATTCCATGATAGACTTTGTCTATTTAATGATTAAAATAGCATCTTAA
TTTTGTTTTCTGAGGAAATT

Downstream 100 bases:

>100_bases
TCCGTGAGTAAAACAAAGTATGACACGCTATATCTGGTACTAGGTATTGTTGGTGCTTTGTTACTTATTTATGGGCTGAG
CCAGAATAATCCCCAAGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: Enhanced Entry Protein

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MSLINYFTKTLLITAFATNAVQAASIFPRGCEVTGFGYSENYLILNETGNQTYYLIQNRSDSKIELERFDNSDAFMIPPL
QASLDPMSWAAFASDVKNLNFKCYKHVDENTALVDCRDVLEVCQYPRVKFALSNMGNYWISTNKSQNEVIQESVAKGIYL
KW

Sequences:

>Translated_162_residues
MSLINYFTKTLLITAFATNAVQAASIFPRGCEVTGFGYSENYLILNETGNQTYYLIQNRSDSKIELERFDNSDAFMIPPL
QASLDPMSWAAFASDVKNLNFKCYKHVDENTALVDCRDVLEVCQYPRVKFALSNMGNYWISTNKSQNEVIQESVAKGIYL
KW
>Mature_161_residues
SLINYFTKTLLITAFATNAVQAASIFPRGCEVTGFGYSENYLILNETGNQTYYLIQNRSDSKIELERFDNSDAFMIPPLQ
ASLDPMSWAAFASDVKNLNFKCYKHVDENTALVDCRDVLEVCQYPRVKFALSNMGNYWISTNKSQNEVIQESVAKGIYLK
W

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18457; Mature: 18326

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLINYFTKTLLITAFATNAVQAASIFPRGCEVTGFGYSENYLILNETGNQTYYLIQNRS
CCHHHHHHHHHHHHHHHHCHHHHHHCCCCCCEEEECCCCCCEEEEECCCCEEEEEEECCC
DSKIELERFDNSDAFMIPPLQASLDPMSWAAFASDVKNLNFKCYKHVDENTALVDCRDVL
CCEEEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEECHHHHH
EVCQYPRVKFALSNMGNYWISTNKSQNEVIQESVAKGIYLKW
HHHCCCCEEEEECCCCCEEEECCCCHHHHHHHHHHCCEEECC
>Mature Secondary Structure 
SLINYFTKTLLITAFATNAVQAASIFPRGCEVTGFGYSENYLILNETGNQTYYLIQNRS
CHHHHHHHHHHHHHHHHCHHHHHHCCCCCCEEEECCCCCCEEEEECCCCEEEEEEECCC
DSKIELERFDNSDAFMIPPLQASLDPMSWAAFASDVKNLNFKCYKHVDENTALVDCRDVL
CCEEEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEECHHHHH
EVCQYPRVKFALSNMGNYWISTNKSQNEVIQESVAKGIYLKW
HHHCCCCEEEEECCCCCEEEECCCCHHHHHHHHHHCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA