Click here to switch to the map view.

The map label for this gene is lidK [H]

Identifier: 54294372

GI number: 54294372

Start: 1606394

End: 1607161

Strand: Reverse

Name: lidK [H]

Synonym: lpl1441

Alternate gene names: 54294372

Gene position: 1607161-1606394 (Counterclockwise)

Preceding gene: 54294377

Following gene: 54294371

Centisome position: 48.04

GC content: 35.55

Gene sequence:

>768_bases
ATGAATCCAATAAAGCCTCCCTTTACCCTTAATCAATATTTTGCCGCCTGGCTCGTCCATGTATTTACTGCCAGCGCTGC
CTGTATTGGTGTCTTTAGCTTATATAAAATTTACCAGCATGATTATGTATTTGCTTTATGGCTAATGGCAATTACTGTAT
TTATTGACGCAGTAGATGGTAGCCTTGCTCGATTGGTTCATGTAAAAAGTGTATTGCCTAAAATTGATGGCGCTTTATTA
GACAATATAGTTGACTATTTGAATTATGTCATTACTCCATGTTTTTTCTTGCTAGTTAAACCGGGTATGCTGCCAGCTGA
TTATGTCGTGCCAATTATATCCGCAATTACAATTACATCAGCCTATCAATTCTGCCAGGATGACGCCAAAACTCCCGATC
ACTTTTTTAAAGGGTTCCCCTGCTATTGGAATATTACTGTCTTCTATATGTATATTTTTAACACTTCTATGATTGTGAAC
ACTATCCTCTTGTCCCTTTTTTGTGTACTGATTTTTATTCCAGTAAAATATGTTTACCCATCAAGGTTAGATTACTTGAC
TGAGTCGAGAATCTTGAAAATATTAATGCATTGTTGTTCTGCTCTTTATGGCATCAGTTCATTTTGCCTGCTAGTTAATT
ACCCTGAAACAAATAAATTATGGGTAAGCCTATCTTTAGGCTACGTGGGCATGTATTTATTTTTAAGTTTCTACAGGACT
TATTATCCAATGTTCAAAGCTAAGATCACGGCAAATAATAAAGATTGA

Upstream 100 bases:

>100_bases
AGATTTAATCATTGCGCTGGATATTTTTAAAGTAACTTGTTTTTTGCTTTTACAAAAAAGACTGAAGCCCTAATTACATT
GATTAACTCTAGGATAAGTA

Downstream 100 bases:

>100_bases
GTTTAAATGTAATTTATGTTTTCCATGCAGATATTACATTTCTGGCAGCACTGTTTTATCTTACTTTTTTAGGAATTTTT
CTGTTCTTATTGCTTTAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: PC synthase; CDP-diglyceride-choline O-phosphatidyltransferase [H]

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MNPIKPPFTLNQYFAAWLVHVFTASAACIGVFSLYKIYQHDYVFALWLMAITVFIDAVDGSLARLVHVKSVLPKIDGALL
DNIVDYLNYVITPCFFLLVKPGMLPADYVVPIISAITITSAYQFCQDDAKTPDHFFKGFPCYWNITVFYMYIFNTSMIVN
TILLSLFCVLIFIPVKYVYPSRLDYLTESRILKILMHCCSALYGISSFCLLVNYPETNKLWVSLSLGYVGMYLFLSFYRT
YYPMFKAKITANNKD

Sequences:

>Translated_255_residues
MNPIKPPFTLNQYFAAWLVHVFTASAACIGVFSLYKIYQHDYVFALWLMAITVFIDAVDGSLARLVHVKSVLPKIDGALL
DNIVDYLNYVITPCFFLLVKPGMLPADYVVPIISAITITSAYQFCQDDAKTPDHFFKGFPCYWNITVFYMYIFNTSMIVN
TILLSLFCVLIFIPVKYVYPSRLDYLTESRILKILMHCCSALYGISSFCLLVNYPETNKLWVSLSLGYVGMYLFLSFYRT
YYPMFKAKITANNKD
>Mature_255_residues
MNPIKPPFTLNQYFAAWLVHVFTASAACIGVFSLYKIYQHDYVFALWLMAITVFIDAVDGSLARLVHVKSVLPKIDGALL
DNIVDYLNYVITPCFFLLVKPGMLPADYVVPIISAITITSAYQFCQDDAKTPDHFFKGFPCYWNITVFYMYIFNTSMIVN
TILLSLFCVLIFIPVKYVYPSRLDYLTESRILKILMHCCSALYGISSFCLLVNYPETNKLWVSLSLGYVGMYLFLSFYRT
YYPMFKAKITANNKD

Specific function: Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP [H]

COG id: COG1183

COG function: function code I; Phosphatidylserine synthase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000462 [H]

Pfam domain/function: PF01066 CDP-OH_P_transf [H]

EC number: =2.7.8.24 [H]

Molecular weight: Translated: 29290; Mature: 29290

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHEEEECCCCC
>Mature Secondary Structure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HHHHHHEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10858449; 11481430 [H]