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The map label for this gene is 54294321

Identifier: 54294321

GI number: 54294321

Start: 1548396

End: 1548953

Strand: Reverse

Name: 54294321

Synonym: lpl1386

Alternate gene names: NA

Gene position: 1548953-1548396 (Counterclockwise)

Preceding gene: 54294323

Following gene: 54294301

Centisome position: 46.3

GC content: 38.71

Gene sequence:

>558_bases
ATGGAAGCTTTAATCGTATCACTTGGGGTGATTACCCTTGCAGAAATTGGCGATAAAACACAATTACTCGCCTTCCTTCT
GGCAGCACAATTTAAAAAGCCATTGCCAATTATTTTGGGAATATTGACCGCTACTTTGATAAATCATTCTTTGGCTGGAC
TCATCGGGATCTGGATTACCACTTTATTGAAGCCGAATGTTTTGCGTTGGATACTTGGCATATCGTTTATTCTAATGGCA
ATATGGACGCTGATACCCGATGAAATCGAACAGGATGAGAAAAAAATATCCAAATATCTTGGTGTTTTTGGAGCAACGTT
TATCACTTTCTTTCTGTCAGAAACAGGAGATAAAACACAAATTGCAACCATTGCCCTGGCAGCACACTATAACTCCCCGA
TCCTGGTTATTGCCGGTTCAACCCTTGGAATGTTGCTTGCTGATTTACCAGCTGTTTATTTTGGAAATTTATTTTCCCAT
AAAATTCCCATGAAAATAATTCGTGCTGTAGCTGCATGCGCTTTTTTAATTATTGGACTCATTACCATCTTGTTTTGA

Upstream 100 bases:

>100_bases
TACCTGCCAATGAGTTTTTATTTGAATTAATAACTGTTTCCTCTCTTTCATGGCAAAATAGAGGTATAATAATTCATTTT
GATTCCTTACATACTTTCCA

Downstream 100 bases:

>100_bases
CCGACTAGGCAGGATTGTTATTTAACATAAGCATCTAGCCAGTTGGTATATCTTTTTAATCTGTCGATGACAAAGCTTGG
TTTCTCCAAAGTATGATATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MEALIVSLGVITLAEIGDKTQLLAFLLAAQFKKPLPIILGILTATLINHSLAGLIGIWITTLLKPNVLRWILGISFILMA
IWTLIPDEIEQDEKKISKYLGVFGATFITFFLSETGDKTQIATIALAAHYNSPILVIAGSTLGMLLADLPAVYFGNLFSH
KIPMKIIRAVAACAFLIIGLITILF

Sequences:

>Translated_185_residues
MEALIVSLGVITLAEIGDKTQLLAFLLAAQFKKPLPIILGILTATLINHSLAGLIGIWITTLLKPNVLRWILGISFILMA
IWTLIPDEIEQDEKKISKYLGVFGATFITFFLSETGDKTQIATIALAAHYNSPILVIAGSTLGMLLADLPAVYFGNLFSH
KIPMKIIRAVAACAFLIIGLITILF
>Mature_185_residues
MEALIVSLGVITLAEIGDKTQLLAFLLAAQFKKPLPIILGILTATLINHSLAGLIGIWITTLLKPNVLRWILGISFILMA
IWTLIPDEIEQDEKKISKYLGVFGATFITFFLSETGDKTQIATIALAAHYNSPILVIAGSTLGMLLADLPAVYFGNLFSH
KIPMKIIRAVAACAFLIIGLITILF

Specific function: Unknown

COG id: COG2119

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20077; Mature: 20077

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEALIVSLGVITLAEIGDKTQLLAFLLAAQFKKPLPIILGILTATLINHSLAGLIGIWIT
CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TLLKPNVLRWILGISFILMAIWTLIPDEIEQDEKKISKYLGVFGATFITFFLSETGDKTQ
HHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
IATIALAAHYNSPILVIAGSTLGMLLADLPAVYFGNLFSHKIPMKIIRAVAACAFLIIGL
HHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ITILF
HHHHC
>Mature Secondary Structure
MEALIVSLGVITLAEIGDKTQLLAFLLAAQFKKPLPIILGILTATLINHSLAGLIGIWIT
CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TLLKPNVLRWILGISFILMAIWTLIPDEIEQDEKKISKYLGVFGATFITFFLSETGDKTQ
HHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
IATIALAAHYNSPILVIAGSTLGMLLADLPAVYFGNLFSHKIPMKIIRAVAACAFLIIGL
HHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ITILF
HHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA