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The map label for this gene is 54294103

Identifier: 54294103

GI number: 54294103

Start: 1301696

End: 1302733

Strand: Direct

Name: 54294103

Synonym: lpl1167

Alternate gene names: NA

Gene position: 1301696-1302733 (Clockwise)

Preceding gene: 54294102

Following gene: 54294105

Centisome position: 38.91

GC content: 36.13

Gene sequence:

>1038_bases
ATGCTGTTTCGACATAAGGGAATACTATATTTATTCCTGAGTTCGCTCATAATAAGTGCCGCTAATCCTGTCATAGCAAA
ACTTATCACTCTTGGGAATGAGCATTTGGTGAATGGTCGTAATCCAATTTCGTTTTGTAATGTCTTATTTGCCGGAAACT
TCATCGCAGCGCTCACTTTGATTTTAATTCATTTTAGAGAGCTAAAAGAATTTCAACCAGAACATTTAACAGCGAAAAAT
TGGTGTTTAATTTTTCTGGCTGCTTTATTCGCAGGTTTTTTAACGCCCACCTTATTTTTTTTTGGATTAATGTACACCAA
TGTGATTAATGTTGTTCTTATTTCCAATCTACAGATCCCTATGACTTTATTAGCCGGCTGGATTTTCTTGGGAGAGGTGC
CTAATATTCGAGTAACCACAGGGGCTTTTTTAGCTACCTTGGGAGTATTTGCAATAGTTATTCTTCAATATTGGTTGGGG
GGAGCAGGTGCTTTAACTCCAAACCCTGAAATGAAAACAGATCCTCTTTTTATTTTTCTCAGCTCTATTCCTCGTTCAGG
TGAAATTTGTATTTTTTTGGCAGTAGTTTCCAGTACTGCTTCAACTATTATTGGTTTTCATGCACTTAGAAGATTACCCC
ATTATCTGTTTAGTATTTTAAAAATGTTATTGGGGCTTGTTTTATTCTTTTTTATAGTGATTTCTATGTTTGGTTGGCAT
CATTTTGCTGATCTTTTCTCCCCATTTTTATGGGAGTGGATGCTCTTTTATGGGAGTGTTATTATTGCTTTGCGATATTA
TTTCAGTATGCTGGGCATGAAACATGCAAAAGTTGCAGAGGTTGCAATCAGTTCATCAATAATTCCTCTGATGTCTATTA
TTTTTTCCTATTTGATATTAGGTGAAGTTCCCGGTATTTCGCAAATCATAGGTGGAAGTTTAATTTTGTTCGGGATATAT
GTTGCTTTAACAGGAAAATTACAGGCTCCCGAGAAAACCGAAATCTTGGAAAAACCTTCGGGTTTCTCGGGTGTTTAG

Upstream 100 bases:

>100_bases
TACTATTTATTGCCGTCTCTCACCTGAAAAAAGATGTAGATACAGGTAAAATTGAGTGTACAAGATTAAAGACTTGATAA
GGATGTGGGGGTAAATTAAG

Downstream 100 bases:

>100_bases
AATGACTATTTTTCTGTGAATAAAACCTTATTTTTGCTAGTTAGATCAAAAATATAACAGCAAGAAATAAGGTTTGATAT
GTTTGTATTTTCAAGTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MLFRHKGILYLFLSSLIISAANPVIAKLITLGNEHLVNGRNPISFCNVLFAGNFIAALTLILIHFRELKEFQPEHLTAKN
WCLIFLAALFAGFLTPTLFFFGLMYTNVINVVLISNLQIPMTLLAGWIFLGEVPNIRVTTGAFLATLGVFAIVILQYWLG
GAGALTPNPEMKTDPLFIFLSSIPRSGEICIFLAVVSSTASTIIGFHALRRLPHYLFSILKMLLGLVLFFFIVISMFGWH
HFADLFSPFLWEWMLFYGSVIIALRYYFSMLGMKHAKVAEVAISSSIIPLMSIIFSYLILGEVPGISQIIGGSLILFGIY
VALTGKLQAPEKTEILEKPSGFSGV

Sequences:

>Translated_345_residues
MLFRHKGILYLFLSSLIISAANPVIAKLITLGNEHLVNGRNPISFCNVLFAGNFIAALTLILIHFRELKEFQPEHLTAKN
WCLIFLAALFAGFLTPTLFFFGLMYTNVINVVLISNLQIPMTLLAGWIFLGEVPNIRVTTGAFLATLGVFAIVILQYWLG
GAGALTPNPEMKTDPLFIFLSSIPRSGEICIFLAVVSSTASTIIGFHALRRLPHYLFSILKMLLGLVLFFFIVISMFGWH
HFADLFSPFLWEWMLFYGSVIIALRYYFSMLGMKHAKVAEVAISSSIIPLMSIIFSYLILGEVPGISQIIGGSLILFGIY
VALTGKLQAPEKTEILEKPSGFSGV
>Mature_345_residues
MLFRHKGILYLFLSSLIISAANPVIAKLITLGNEHLVNGRNPISFCNVLFAGNFIAALTLILIHFRELKEFQPEHLTAKN
WCLIFLAALFAGFLTPTLFFFGLMYTNVINVVLISNLQIPMTLLAGWIFLGEVPNIRVTTGAFLATLGVFAIVILQYWLG
GAGALTPNPEMKTDPLFIFLSSIPRSGEICIFLAVVSSTASTIIGFHALRRLPHYLFSILKMLLGLVLFFFIVISMFGWH
HFADLFSPFLWEWMLFYGSVIIALRYYFSMLGMKHAKVAEVAISSSIIPLMSIIFSYLILGEVPGISQIIGGSLILFGIY
VALTGKLQAPEKTEILEKPSGFSGV

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 38251; Mature: 38251

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFRHKGILYLFLSSLIISAANPVIAKLITLGNEHLVNGRNPISFCNVLFAGNFIAALTL
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHH
ILIHFRELKEFQPEHLTAKNWCLIFLAALFAGFLTPTLFFFGLMYTNVINVVLISNLQIP
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
MTLLAGWIFLGEVPNIRVTTGAFLATLGVFAIVILQYWLGGAGALTPNPEMKTDPLFIFL
HHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHEEEE
SSIPRSGEICIFLAVVSSTASTIIGFHALRRLPHYLFSILKMLLGLVLFFFIVISMFGWH
ECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HFADLFSPFLWEWMLFYGSVIIALRYYFSMLGMKHAKVAEVAISSSIIPLMSIIFSYLIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GEVPGISQIIGGSLILFGIYVALTGKLQAPEKTEILEKPSGFSGV
HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCC
>Mature Secondary Structure
MLFRHKGILYLFLSSLIISAANPVIAKLITLGNEHLVNGRNPISFCNVLFAGNFIAALTL
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHH
ILIHFRELKEFQPEHLTAKNWCLIFLAALFAGFLTPTLFFFGLMYTNVINVVLISNLQIP
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
MTLLAGWIFLGEVPNIRVTTGAFLATLGVFAIVILQYWLGGAGALTPNPEMKTDPLFIFL
HHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHEEEE
SSIPRSGEICIFLAVVSSTASTIIGFHALRRLPHYLFSILKMLLGLVLFFFIVISMFGWH
ECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HFADLFSPFLWEWMLFYGSVIIALRYYFSMLGMKHAKVAEVAISSSIIPLMSIIFSYLIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GEVPGISQIIGGSLILFGIYVALTGKLQAPEKTEILEKPSGFSGV
HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]