Click here to switch to the map view.

The map label for this gene is 54294105

Identifier: 54294105

GI number: 54294105

Start: 1303412

End: 1304062

Strand: Direct

Name: 54294105

Synonym: lpl1169

Alternate gene names: NA

Gene position: 1303412-1304062 (Clockwise)

Preceding gene: 54294103

Following gene: 54294107

Centisome position: 38.96

GC content: 38.86

Gene sequence:

>651_bases
ATGGATCGCTTTCAAGATCGTTATCAAGCTGGACAATTATTAGGAGAGAAACTTAAGCCTTACGCGAACCGAAATGATGT
CATAGTGCTTGCACTACCCCGTGGAGGAGTGCCTGTGGCTGCAATGATTTCTGAGGCTATAAATGCTCCATTAGATCTAA
TGATTGTTCGCAAACTGGGTGTTCCTGGGCATGAAGAATTAGCTTTCGGTGCTTTGGCCATTAATAAAATAAAAGTTTAT
AATGAAGAGCTGTTGCAATATTTGCAACTTTCTCAAAAAGACATTAATCAGGTTCTTTCTCAAGAAGAAAAGGAATTAGC
AAGGCGGAATAGAGCTTATCGTGGTGACAAACCTTTTCCTGATTTAAAAAATAAAATCGTAATTCTGGTAGATGACGGTA
TTGCCACAGGCGCTAGTATGCGTGCAGCTGTTCTTGCTTTACGTAAGGAGTCACCTAAAAAAATTATAGTAGCGGTTCCT
GTAGCACCTGAAGATATGAAAGACATAATGAAAAGTGTTGCGGATGAATACATTTGTCTTATATCCCCCATGTCTTTTAA
CGCTGTGGGTCTTTGGTATGAAGACTTCTCCCAGACTGAGGATGAAGAAGTATTATATTTACTTGGAAAAGTATACGATA
GAAAAGTCTAA

Upstream 100 bases:

>100_bases
ATTCAGAGAAGATTAATCATTATAAACTCTTGCTGACAGCAGGATAATTTCTAGATCTGAACTACAATAAAAATAGCAGG
ACAGATAATTGAGTAGGAAA

Downstream 100 bases:

>100_bases
AAATAACAAATGACAAACATGACAAAGTGAAAGACAGGAGCTTTTATCTCTTTTTTGAGTTCTGTGAAGATCTGTTGAAG
GAATAAGTTAAAAAGTCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MDRFQDRYQAGQLLGEKLKPYANRNDVIVLALPRGGVPVAAMISEAINAPLDLMIVRKLGVPGHEELAFGALAINKIKVY
NEELLQYLQLSQKDINQVLSQEEKELARRNRAYRGDKPFPDLKNKIVILVDDGIATGASMRAAVLALRKESPKKIIVAVP
VAPEDMKDIMKSVADEYICLISPMSFNAVGLWYEDFSQTEDEEVLYLLGKVYDRKV

Sequences:

>Translated_216_residues
MDRFQDRYQAGQLLGEKLKPYANRNDVIVLALPRGGVPVAAMISEAINAPLDLMIVRKLGVPGHEELAFGALAINKIKVY
NEELLQYLQLSQKDINQVLSQEEKELARRNRAYRGDKPFPDLKNKIVILVDDGIATGASMRAAVLALRKESPKKIIVAVP
VAPEDMKDIMKSVADEYICLISPMSFNAVGLWYEDFSQTEDEEVLYLLGKVYDRKV
>Mature_216_residues
MDRFQDRYQAGQLLGEKLKPYANRNDVIVLALPRGGVPVAAMISEAINAPLDLMIVRKLGVPGHEELAFGALAINKIKVY
NEELLQYLQLSQKDINQVLSQEEKELARRNRAYRGDKPFPDLKNKIVILVDDGIATGASMRAAVLALRKESPKKIIVAVP
VAPEDMKDIMKSVADEYICLISPMSFNAVGLWYEDFSQTEDEEVLYLLGKVYDRKV

Specific function: Unknown

COG id: COG1926

COG function: function code R; Predicted phosphoribosyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: In the N-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007815
- InterPro:   IPR000836 [H]

Pfam domain/function: PF05139 Erythro_esteras; PF00156 Pribosyltran [H]

EC number: NA

Molecular weight: Translated: 24235; Mature: 24235

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRFQDRYQAGQLLGEKLKPYANRNDVIVLALPRGGVPVAAMISEAINAPLDLMIVRKLG
CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHCC
VPGHEELAFGALAINKIKVYNEELLQYLQLSQKDINQVLSQEEKELARRNRAYRGDKPFP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
DLKNKIVILVDDGIATGASMRAAVLALRKESPKKIIVAVPVAPEDMKDIMKSVADEYICL
CCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCEEEE
ISPMSFNAVGLWYEDFSQTEDEEVLYLLGKVYDRKV
ECCCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDRFQDRYQAGQLLGEKLKPYANRNDVIVLALPRGGVPVAAMISEAINAPLDLMIVRKLG
CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHCC
VPGHEELAFGALAINKIKVYNEELLQYLQLSQKDINQVLSQEEKELARRNRAYRGDKPFP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
DLKNKIVILVDDGIATGASMRAAVLALRKESPKKIIVAVPVAPEDMKDIMKSVADEYICL
CCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCEEEE
ISPMSFNAVGLWYEDFSQTEDEEVLYLLGKVYDRKV
ECCCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]